| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2003_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2003_05 | THIS_month:psum | 4.2 | 2.5 | 12.9 | 7.3 | 14 | 23.7 | 90 | 10.0 | 36.6 | 42.1 | 126.9 |
| fr | 2003_05 | 1h5o:A | 3.1 | 2.0 | -1.607368e+01 | -1.132770e+01 | 9.5e+00 | 2.6e+01 | 9.0e+01 | 2.87e+01 | 3.6e+01 | 3.6e+01 | 42 |
| fr | 2003_05 | 1hl6:B | 2.9 | 2.0 | -2.962400e+00 | 4.112355e+00 | 2.2e+00 | 7.3e+00 | 9.8e+01 | 2.00e+00 | 1.5e+01 | 2.3e+01 | 137 |
| fr | 2003_05 | 1mm0:A | 4.2 | 2.8 | 2.892883e+01 | 2.410734e+01 | 7.8e+01 | 8.1e+01 | 8.9e+01 | 1.61e+01 | 8.1e+01 | 8.3e+01 | 36 |
| fr | 2003_05 | 1n1c:A | 2.0 | 3.7 | -2.643152e+00 | 3.372609e+00 | 1.0e+00 | 2.0e+00 | 8.5e+01 | 1.66e+00 | 1.5e+01 | 1.8e+01 | 196 |
| fr | 2003_05 | 1n6z:A | 2.1 | 2.0 | -4.570765e+00 | -1.782777e-01 | 6.7e+00 | 1.3e+01 | 9.9e+01 | 2.59e+00 | 3.1e+01 | 3.5e+01 | 105 |
| fr | 2003_05 | 1nj7:A | 3.4 | 2.3 | -1.133331e+01 | -9.121386e+00 | 2.4e+01 | 3.1e+01 | 9.1e+01 | 3.48e+01 | 3.8e+01 | 4.5e+01 | 58 |
| fr | 2003_05 | 1o9g:A | 14.2 | 2.3 | 3.520023e+00 | 4.169569e+00 | 1.6e+01 | 3.0e+01 | 9.3e+01 | 1.47e+00 | 5.0e+01 | 5.6e+01 | 247 |
| fr | 2003_05 | 1o9v:A | 5.9 | 4.1 | -3.872972e+00 | 8.106808e+00 | 1.2e+00 | 1.1e+01 | 9.2e+01 | 6.74e-01 | 5.7e+01 | 6.8e+01 | 168 |
| fr | 2003_05 | 1oqd:K | 2.5 | 2.0 | -2.262184e+01 | -1.523300e+01 | 1.5e+01 | 4.4e+01 | 6.9e+01 | 4.06e+01 | 4.1e+01 | 4.1e+01 | 39 |
| fr | 2003_05 | 1ors:C | 6.8 | 4.2 | 6.441528e+00 | 9.166982e+00 | 8.3e+00 | 1.4e+01 | 9.8e+01 | 1.90e+00 | 3.6e+01 | 4.5e+01 | 132 |
| fr | 2003_05 | 1owt:A | 4.3 | 1.2 | -1.174615e+01 | -4.892893e+00 | 1.1e+01 | 3.3e+01 | 7.9e+01 | 8.56e-03 | 4.2e+01 | 5.3e+01 | 66 |
| fr | 2003_05 | 1oxw:A | 1.9 | 2.0 | -1.123301e+00 | 5.136653e-01 | 1.1e+00 | 4.0e+00 | 9.4e+01 | 1.11e-01 | 1.4e+01 | 2.1e+01 | 349 |
| fr | 2003_05 | 1ub4:C | 2.1 | 2.0 | -8.725714e+00 | 5.289723e+00 | 8.0e+00 | 1.2e+01 | 9.3e+01 | 6.37e-01 | 2.0e+01 | 2.4e+01 | 75 |
| fr | 2003_05 | THIS_month:psum | 4.2 | 2.5 | 12.9 | 7.3 | 14 | 23.7 | 90 | 10.0 | 36.6 | 42.1 | 126.9 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |