| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2003_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2003_05 | THIS_month:psum | 2.2 | 1.5 | 28.9 | 7.2 | 9.1 | 13.6 | 72.3 | 10.0 | 21.7 | 28.5 | 126.9 |
| fr | 2003_05 | 1h5o:A | 1.2 | 0.7 | -2.030778e+01 | -1.442908e+01 | 9.5e+00 | 2.1e+01 | 7.1e+01 | 2.87e+01 | 2.4e+01 | 3.6e+01 | 42 |
| fr | 2003_05 | 1hl6:B | 2.9 | 0.7 | -9.850510e+00 | -2.488295e+00 | 7.3e-01 | 4.4e+00 | 4.5e+01 | 2.00e+00 | 7.3e+00 | 1.4e+01 | 137 |
| fr | 2003_05 | 1mm0:A | 4.1 | 2.8 | 2.892883e+01 | 2.410734e+01 | 7.5e+01 | 8.1e+01 | 8.3e+01 | 1.61e+01 | 7.8e+01 | 8.1e+01 | 36 |
| fr | 2003_05 | 1n1c:A | 1.7 | 2.8 | -3.875127e+00 | 2.540740e-01 | 5.1e-01 | 1.0e+00 | 7.4e+01 | 1.66e+00 | 1.5e+01 | 1.7e+01 | 196 |
| fr | 2003_05 | 1n6z:A | 2.0 | 1.2 | -4.570765e+00 | -4.627606e+00 | 0.0e+00 | 9.5e-01 | 9.9e+01 | 2.59e+00 | 1.9e+01 | 2.7e+01 | 105 |
| fr | 2003_05 | 1nj7:A | 1.6 | 0.7 | -1.693355e+01 | -1.045889e+01 | 1.7e+00 | 5.2e+00 | 6.2e+01 | 3.48e+01 | 2.1e+01 | 3.3e+01 | 58 |
| fr | 2003_05 | 1o9g:A | 5.5 | 1.6 | -1.794155e+00 | -1.086706e-01 | 2.0e+00 | 5.7e+00 | 7.5e+01 | 1.47e+00 | 1.4e+01 | 2.3e+01 | 247 |
| fr | 2003_05 | 1o9v:A | 1.5 | 1.6 | -5.603490e+00 | 4.132661e+00 | 6.0e-01 | 3.6e+00 | 6.5e+01 | 6.74e-01 | 1.6e+01 | 2.2e+01 | 168 |
| fr | 2003_05 | 1oqd:K | 0.7 | 2.0 | -2.776266e+01 | -1.566074e+01 | 1.3e+01 | 2.6e+01 | 5.6e+01 | 4.06e+01 | 2.6e+01 | 3.6e+01 | 39 |
| fr | 2003_05 | 1ors:C | 4.7 | 3.1 | -4.672030e+00 | 9.166982e+00 | 8.3e+00 | 1.4e+01 | 9.7e+01 | 1.90e+00 | 2.8e+01 | 3.6e+01 | 132 |
| fr | 2003_05 | 1owt:A | 0.0 | 0.0 | -1.796471e+01 | -9.254067e+00 | 0.0e+00 | 1.5e+00 | 5.2e+01 | 8.56e-03 | 9.1e+00 | 1.4e+01 | 66 |
| fr | 2003_05 | 1oxw:A | 0.8 | 2.0 | -1.314077e+00 | 5.136653e-01 | 0.0e+00 | 8.6e-01 | 9.4e+01 | 1.11e-01 | 5.4e+00 | 8.6e+00 | 349 |
| fr | 2003_05 | 1ub4:C | 2.1 | 1.2 | -1.197647e+01 | 5.289723e+00 | 8.0e+00 | 1.2e+01 | 6.8e+01 | 6.37e-01 | 2.0e+01 | 2.4e+01 | 75 |
| fr | 2003_05 | THIS_month:psum | 2.2 | 1.5 | 28.9 | 7.2 | 9.1 | 13.6 | 72.3 | 10.0 | 21.7 | 28.5 | 126.9 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |