| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2003_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2003_02 | THIS_month:psum | 6.1 | 3.3 | 20.0 | 14.7 | 28.8 | 40.8 | 84 | 0.6 | 53 | 55 | 73.3 |
| fr | 2003_02 | 1irz:A | 6.0 | 3.5 | 2.001696e+01 | 1.698148e+01 | 3.9e+01 | 5.6e+01 | 6.6e+01 | 0.27 | 6.1e+01 | 6.1e+01 | 64 |
| fr | 2003_02 | 1iyg:A | 1.8 | 2.3 | -1.035254e+01 | -7.471958e+00 | 5.6e+00 | 5.6e+00 | 1.1e+02 | 1.5 | 3.9e+01 | 4.4e+01 | 54 |
| fr | 2003_02 | 1l3p:A | 10.6 | 4.2 | -7.830769e+00 | 1.253115e+01 | 4.2e+01 | 6.1e+01 | 7.6e+01 | 0.04 | 5.9e+01 | 6.0e+01 | 102 |
| fr | 2003_02 | THIS_month:psum | 6.1 | 3.3 | 20.0 | 14.7 | 28.8 | 40.8 | 84 | 0.6 | 53 | 55 | 73.3 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |