| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2003_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2003_01 | THIS_month:psum | 2.4 | 2.4 | 6.0 | 3.6 | 26.4 | 39.3 | 65.3 | 17.1 | 42.3 | 45.6 | 61.6 |
| fr | 2003_01 | 1gvn:A | 1.0 | 2.3 | -2.908571e+01 | -7.004888e+00 | 3.4e+00 | 1.0e+01 | 2.4e+01 | 1.6 | 1.8e+01 | 2.1e+01 | 87 |
| fr | 2003_01 | 1izl:F | 1.9 | 2.0 | -2.106207e+01 | -1.428448e+01 | 3.0e+01 | 5.7e+01 | 9.7e+01 | 42 | 6.0e+01 | 6.0e+01 | 30 |
| fr | 2003_01 | 1jxc:A | 4.3 | 3.1 | 6.064567e+00 | 3.632484e+00 | 4.6e+01 | 5.1e+01 | 7.5e+01 | 7.9 | 4.9e+01 | 5.6e+01 | 68 |
| fr | 2003_01 | THIS_month:psum | 2.4 | 2.4 | 6.0 | 3.6 | 26.4 | 39.3 | 65.3 | 17.1 | 42.3 | 45.6 | 61.6 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |