| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2002_12 | THIS_month:psum | 1.9 | 2.6 | 3.1 | 6.4 | 14.3 | 51.3 | 4.0 | 19.3 | 26.3 | 94.3 | |
| fr | 2002_12 | 1gtd:A | 2.0 | 2.8 | -1.682134e+01 | 1.557938e+00 | 9.2e+00 | 2.2e+01 | 4.7e+01 | 2.5 | 2.5e+01 | 2.9e+01 | 76 |
| fr | 2002_12 | 1j0t:A | 1.5 | 2.6 | -1.107927e+01 | -7.803959e-03 | 3.8e+00 | 9.0e+00 | 7.1e+01 | 3.7 | 1.9e+01 | 3.3e+01 | 78 |
| fr | 2002_12 | 1jog:A | 2.2 | 2.6 | -8.378190e+00 | 4.712240e+00 | 6.2e+00 | 1.2e+01 | 3.6e+01 | 6.0 | 1.4e+01 | 1.7e+01 | 129 |
| fr | 2002_12 | THIS_month:psum | 1.9 | 2.6 | 3.1 | 6.4 | 14.3 | 51.3 | 4.0 | 19.3 | 26.3 | 94.3 | |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |