| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2002_09 | THIS_month:psum | 3.3 | 2.3 | 4.0 | 7.8 | 14.7 | 20.1 | 42.5 | 1.7 | 25.2 | 27.7 | 127 |
| fr | 2002_09 | 1gzs:D | 2.7 | 2.3 | -1.607368e+01 | 5.748643e-01 | 3.0e+00 | 6.7e+00 | 2.3e+01 | 2.0 | 9.8e+00 | 1.5e+01 | 164 |
| fr | 2002_09 | 1h0x:A | 3.5 | 2.6 | -1.908750e+01 | -1.673722e+00 | 1.7e+01 | 2.2e+01 | 3.6e+01 | 0.20 | 2.7e+01 | 3.1e+01 | 89 |
| fr | 2002_09 | 1jx7:A | 7.6 | 2.8 | 4.051979e+00 | 1.131880e+01 | 4.1e+01 | 4.3e+01 | 4.9e+01 | 0.02 | 4.1e+01 | 4.3e+01 | 114 |
| fr | 2002_09 | 1klx:A | 7.6 | 4.1 | -6.522382e+00 | 1.150877e+01 | 4.0e+01 | 5.2e+01 | 6.2e+01 | 0.02 | 5.0e+01 | 5.1e+01 | 133 |
| fr | 2002_09 | 1kn0:A | 2.3 | 1.6 | -8.482433e+00 | -1.576830e+00 | 1.6e+00 | 7.6e+00 | 3.9e+01 | 2.3 | 1.1e+01 | 1.6e+01 | 184 |
| fr | 2002_09 | 1ko6:A | 1.8 | 2.3 | -8.483333e+00 | -3.272324e+00 | 3.9e+00 | 5.9e+00 | 4.7e+01 | 5.1 | 1.4e+01 | 1.6e+01 | 152 |
| fr | 2002_09 | 1koy:A | 0.5 | 2.0 | -1.745143e+01 | -7.486446e+00 | 8.1e+00 | 1.6e+01 | 5.6e+01 | 3.1 | 3.4e+01 | 3.4e+01 | 62 |
| fr | 2002_09 | 1l5i:A | 0.7 | 1.2 | -1.850890e+01 | -5.176271e+00 | 3.4e+00 | 7.6e+00 | 2.8e+01 | 1.6 | 1.5e+01 | 1.6e+01 | 118 |
| fr | 2002_09 | THIS_month:psum | 3.3 | 2.3 | 4.0 | 7.8 | 14.7 | 20.1 | 42.5 | 1.7 | 25.2 | 27.7 | 127 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |