| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2002_09 | THIS_month:psum | 3.6 | 2.5 | 1.2 | 3.7 | 9.3 | 16.5 | 77.0 | 5.2 | 29.0 | 33.9 | 148.9 |
| fr | 2002_09 | 1gzs:D | 2.9 | 2.6 | -5.552671e+00 | 4.738089e+00 | 2.4e+00 | 6.1e+00 | 6.7e+01 | 3.59e+00 | 2.6e+01 | 3.4e+01 | 164 |
| fr | 2002_09 | 1h0x:A | 4.3 | 3.1 | -9.852832e-01 | 5.368938e-01 | 1.5e+01 | 2.6e+01 | 9.9e+01 | 1.37e+00 | 3.8e+01 | 4.8e+01 | 89 |
| fr | 2002_09 | 1klx:A | 11.2 | 4.2 | 1.202913e+00 | 1.092200e+01 | 3.7e+01 | 4.7e+01 | 9.8e+01 | 5.88e-03 | 5.3e+01 | 5.7e+01 | 133 |
| fr | 2002_09 | 1kn0:A | 3.0 | 2.8 | -4.240472e+00 | 3.650155e+00 | 1.1e+00 | 1.6e+00 | 7.8e+01 | 1.32e+00 | 2.0e+01 | 2.5e+01 | 184 |
| fr | 2002_09 | 1ko6:A | 1.0 | 2.3 | -5.405310e+00 | 4.182672e-01 | 1.3e+00 | 3.3e+00 | 7.4e+01 | 9.85e-01 | 2.2e+01 | 2.6e+01 | 152 |
| fr | 2002_09 | 1koy:A | 1.9 | 2.6 | -1.090714e+01 | 9.718549e+00 | 9.7e+00 | 3.4e+01 | 9.0e+01 | 3.36e+01 | 4.0e+01 | 4.5e+01 | 62 |
| fr | 2002_09 | 1l5i:A | 2.4 | 1.6 | -6.296871e+00 | 1.160378e+00 | 3.4e+00 | 5.9e+00 | 8.2e+01 | 1.78e+00 | 2.5e+01 | 2.7e+01 | 118 |
| fr | 2002_09 | 1lrz:A | 6.8 | 3.7 | 1.832830e+00 | 2.492021e+00 | 1.0e+00 | 3.0e+00 | 6.1e+01 | 9.68e-01 | 1.2e+01 | 1.3e+01 | 400 |
| fr | 2002_09 | 1lv3:A | 3.6 | 2.6 | 6.517912e-01 | -5.838217e+00 | 2.0e+01 | 3.5e+01 | 9.5e+01 | 1.35e+01 | 4.2e+01 | 4.8e+01 | 65 |
| fr | 2002_09 | 1m4z:A | 2.0 | 2.3 | -5.595432e+00 | 6.879888e-01 | 0.0e+00 | 9.9e-01 | 5.4e+01 | 1.63e+00 | 1.8e+01 | 2.2e+01 | 203 |
| fr | 2002_09 | 1m8o:B | 2.3 | 2.6 | -2.443200e+01 | -1.165894e+01 | 1.9e+01 | 3.2e+01 | 5.3e+01 | 1.82e-01 | 4.0e+01 | 4.3e+01 | 47 |
| fr | 2002_09 | 1mm5:A | 2.9 | 0.7 | -2.125524e+00 | 2.854612e+00 | 2.4e+00 | 3.5e+00 | 7.4e+01 | 3.83e+00 | 1.3e+01 | 1.9e+01 | 170 |
| fr | 2002_09 | THIS_month:psum | 3.6 | 2.5 | 1.2 | 3.7 | 9.3 | 16.5 | 77.0 | 5.2 | 29.0 | 33.9 | 148.9 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |