| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2002_08 | THIS_month:psum | 3.3 | 2.6 | 17.0 | 11.2 | 14.6 | 17.1 | 45.1 | 5.9 | 24.7 | 28.2 | 189 |
| fr | 2002_08 | 1fl9:A | 5.0 | 3.3 | 1.486708e+01 | 8.997182e-01 | 1.7e+01 | 1.9e+01 | 2.5e+01 | 0.04 | 1.8e+01 | 2.1e+01 | 157 |
| fr | 2002_08 | 1gyh:B | 0.9 | 2.3 | -8.482067e+00 | -1.237883e+00 | 0.0e+00 | 6.3e-01 | 2.3e+01 | 12 | 6.6e+00 | 9.8e+00 | 317 |
| fr | 2002_08 | 1h1j:S | 2.0 | 2.8 | -9.850098e+00 | -1.387837e+01 | 3.9e+01 | 3.9e+01 | 7.5e+01 | 35 | 4.3e+01 | 4.3e+01 | 44 |
| fr | 2002_08 | 1h4l:D | 2.3 | 2.3 | -1.357333e+01 | -4.002385e+00 | 6.8e+00 | 8.8e+00 | 3.1e+01 | 1.6 | 1.0e+01 | 1.3e+01 | 147 |
| fr | 2002_08 | 1itu:A | 0.7 | 0 | -2.545000e+01 | -1.637770e+00 | 1.4e+00 | 2.7e+00 | 6.5e+00 | 3.6 | 0.0e+00 | 0.0e+00 | 369 |
| fr | 2002_08 | 1iu4:A | 1.2 | 2.6 | -8.354186e+00 | -1.171132e+00 | 6.0e-01 | 3.6e+00 | 2.2e+01 | 0.85 | 8.8e+00 | 1.1e+01 | 331 |
| fr | 2002_08 | 1iw4:A | 2.5 | 2.3 | -1.850909e+01 | -5.148956e+00 | 9.1e+00 | 2.2e+01 | 6.0e+01 | 13 | 3.1e+01 | 4.0e+01 | 55 |
| fr | 2002_08 | 1j6r:A | 13.8 | 5.5 | 1.599338e+01 | 1.521089e+01 | 1.5e+00 | 3.0e+00 | 8.4e+01 | 1e-54 | 6.1e+01 | 6.5e+01 | 197 |
| fr | 2002_08 | 1j9i:A | 1.6 | 2.6 | -1.429430e+01 | -7.511377e+00 | 2.4e+01 | 2.4e+01 | 5.7e+01 | 1.2 | 2.4e+01 | 3.1e+01 | 68 |
| fr | 2002_08 | 1jv1:A | 5.9 | 2.3 | -7.358150e+00 | -3.652904e-01 | 7.3e+00 | 7.6e+00 | 1.7e+01 | 0.26 | 8.0e+00 | 8.2e+00 | 490 |
| fr | 2002_08 | 1k4n:A | 1.4 | 2.0 | -1.017998e+01 | -1.975058e-01 | 1.7e+00 | 5.0e+00 | 3.3e+01 | 4.4 | 1.2e+01 | 1.7e+01 | 180 |
| fr | 2002_08 | 1kjn:A | 4.3 | 2.0 | -8.778279e+00 | -1.062316e+00 | 4.1e+00 | 6.1e+00 | 4.7e+01 | 6.5 | 1.4e+01 | 1.8e+01 | 148 |
| fr | 2002_08 | 1koz:A | 4.0 | 3.1 | 2.037451e+01 | 1.754472e+01 | 7.8e+01 | 8.1e+01 | 8.6e+01 | 4.3 | 7.8e+01 | 8.1e+01 | 36 |
| fr | 2002_08 | 1kr4:A | 1.8 | 3.5 | -8.707354e+00 | -1.764044e+00 | 1.4e+01 | 1.7e+01 | 6.5e+01 | 0.26 | 3.2e+01 | 3.8e+01 | 107 |
| fr | 2002_08 | THIS_month:psum | 3.3 | 2.6 | 17.0 | 11.2 | 14.6 | 17.1 | 45.1 | 5.9 | 24.7 | 28.2 | 189 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |