| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2002_08 | THIS_month:psum | 7.9 | 3.3 | 9.8 | 10.1 | 31.6 | 41.3 | 87.9 | 3.7 | 51.5 | 58.1 | 168.5 |
| fr | 2002_08 | 1fl9:A | 8.2 | 2.0 | 4.652429e+00 | 4.539178e+00 | 1.2e+01 | 2.6e+01 | 9.7e+01 | 4.76e-06 | 4.1e+01 | 4.8e+01 | 157 |
| fr | 2002_08 | 1gyh:B | 3.1 | 2.8 | -2.469372e+00 | 2.838804e+00 | 4.1e+00 | 8.8e+00 | 7.7e+01 | 8.75e-01 | 3.0e+01 | 4.2e+01 | 317 |
| fr | 2002_08 | 1h1j:S | 5.8 | 3.3 | 8.455558e+00 | 5.916461e+00 | 6.6e+01 | 8.6e+01 | 1.0e+02 | 1.08e+01 | 7.7e+01 | 8.2e+01 | 44 |
| fr | 2002_08 | 1h4l:D | 13.3 | 4.9 | -4.558209e+00 | 8.801307e+00 | 2.2e+01 | 3.3e+01 | 9.1e+01 | 2.13e+00 | 5.1e+01 | 6.1e+01 | 147 |
| fr | 2002_08 | 1itu:A | 14.1 | 3.3 | 5.688746e+00 | 6.715397e+00 | 1.3e+01 | 2.1e+01 | 7.6e+01 | 4.28e-01 | 3.0e+01 | 3.6e+01 | 369 |
| fr | 2002_08 | 1iu4:A | 1.7 | 2.6 | -1.012409e+00 | -7.452598e-01 | 2.7e+00 | 5.7e+00 | 7.5e+01 | 4.92e-01 | 9.4e+00 | 1.6e+01 | 331 |
| fr | 2002_08 | 1iw4:A | 7.4 | 1.6 | 4.839854e+00 | 6.916127e+00 | 5.8e+01 | 7.3e+01 | 9.1e+01 | 1.25e-01 | 6.9e+01 | 7.8e+01 | 55 |
| fr | 2002_08 | 1j6r:A | 2.3 | 2.6 | 4.808107e+00 | 5.108839e+00 | 1.0e+00 | 4.1e+00 | 9.0e+01 | 4.30e+00 | 2.3e+01 | 2.4e+01 | 197 |
| fr | 2002_08 | 1j9i:A | 4.8 | 2.6 | 1.132262e+01 | 9.309688e+00 | 1.0e+01 | 2.1e+01 | 9.6e+01 | 5.71e+00 | 3.8e+01 | 5.0e+01 | 68 |
| fr | 2002_08 | 1jv1:A | 19.9 | 2.8 | -2.307283e+00 | 6.227854e+00 | 8.2e+00 | 1.5e+01 | 5.4e+01 | 1.50e-01 | 3.5e+01 | 4.0e+01 | 490 |
| fr | 2002_08 | 1koz:A | 4.7 | 3.1 | 2.130561e+01 | 1.818206e+01 | 7.8e+01 | 8.6e+01 | 9.4e+01 | 5.90e-01 | 8.1e+01 | 8.6e+01 | 36 |
| fr | 2002_08 | 1l7y:A | 10.9 | 4.1 | 1.476230e+01 | 1.289323e+01 | 5.7e+01 | 6.9e+01 | 9.0e+01 | 2.13e+00 | 7.0e+01 | 7.4e+01 | 94 |
| fr | 2002_08 | 1l8d:A | 10.5 | 4.9 | -6.169697e+00 | 2.765172e+01 | 2.3e+01 | 2.7e+01 | 9.6e+01 | 3.08e-01 | 8.2e+01 | 8.2e+01 | 103 |
| fr | 2002_08 | 1lmz:A | 10.4 | 3.9 | 7.725221e+00 | 3.936875e+00 | 1.2e+01 | 2.5e+01 | 8.8e+01 | 3.63e-01 | 3.7e+01 | 4.8e+01 | 187 |
| fr | 2002_08 | 1lup:A | 3.9 | 2.8 | 1.161465e+01 | 1.123558e+01 | 7.4e+01 | 8.4e+01 | 9.7e+01 | 3.69e+01 | 7.7e+01 | 8.4e+01 | 31 |
| fr | 2002_08 | 1m44:B | 14.2 | 5.3 | 1.875203e+00 | 1.525543e+01 | 3.1e+01 | 4.8e+01 | 8.8e+01 | 4.81e-03 | 6.1e+01 | 6.9e+01 | 180 |
| fr | 2002_08 | 1m55:A | 3.6 | 3.7 | 5.975054e+00 | 3.075437e+00 | 6.2e+00 | 1.7e+01 | 8.3e+01 | 2.33e+00 | 2.5e+01 | 3.2e+01 | 193 |
| fr | 2002_08 | 1mb6:A | 5.0 | 3.1 | 2.548846e+01 | 2.461361e+01 | 9.1e+01 | 9.4e+01 | 1.0e+02 | 4.72e-01 | 9.1e+01 | 9.4e+01 | 35 |
| fr | 2002_08 | THIS_month:psum | 7.9 | 3.3 | 9.8 | 10.1 | 31.6 | 41.3 | 87.9 | 3.7 | 51.5 | 58.1 | 168.5 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |