| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2002_08 | THIS_month:psum | 5.0 | 2.5 | 9.1 | 8.5 | 26.9 | 33.8 | 79 | 3.7 | 41.3 | 47.0 | 168.5 |
| fr | 2002_08 | 1fl9:A | 5.3 | 1.6 | 4.287233e+00 | 2.686710e+00 | 4.5e+00 | 1.4e+01 | 9.7e+01 | 4.76e-06 | 4.1e+01 | 4.8e+01 | 157 |
| fr | 2002_08 | 1gyh:B | 1.9 | 2.0 | -2.934231e+00 | 2.651080e-01 | 3.2e+00 | 8.8e+00 | 6.5e+01 | 8.75e-01 | 1.7e+01 | 2.5e+01 | 317 |
| fr | 2002_08 | 1h1j:S | 5.8 | 3.3 | 4.513591e+00 | 4.001677e+00 | 6.6e+01 | 8.6e+01 | 9.5e+01 | 1.08e+01 | 7.7e+01 | 8.2e+01 | 44 |
| fr | 2002_08 | 1h4l:D | 2.6 | 2.0 | -4.627273e+00 | -7.431277e-02 | 0.0e+00 | 4.1e+00 | 9.0e+01 | 2.13e+00 | 2.3e+01 | 2.8e+01 | 147 |
| fr | 2002_08 | 1itu:A | 2.0 | 2.0 | 2.229230e+00 | -8.066984e-01 | 0.0e+00 | 1.1e+00 | 7.6e+01 | 4.28e-01 | 1.8e+01 | 2.3e+01 | 369 |
| fr | 2002_08 | 1iu4:A | 1.0 | 1.6 | -1.942811e+00 | -7.452598e-01 | 0.0e+00 | 3.0e-01 | 4.7e+01 | 4.92e-01 | 4.2e+00 | 1.1e+01 | 331 |
| fr | 2002_08 | 1iw4:A | 3.1 | 0.7 | 3.392377e+00 | 4.533346e+00 | 5.8e+01 | 7.3e+01 | 8.5e+01 | 1.25e-01 | 6.5e+01 | 7.6e+01 | 55 |
| fr | 2002_08 | 1j6r:A | 1.4 | 2.3 | 1.237142e+00 | 3.623318e+00 | 0.0e+00 | 5.1e-01 | 6.0e+01 | 4.30e+00 | 2.3e+01 | 2.4e+01 | 197 |
| fr | 2002_08 | 1j9i:A | 1.8 | 1.6 | 1.132262e+01 | -7.079464e+00 | 8.8e+00 | 1.8e+01 | 8.1e+01 | 5.71e+00 | 2.1e+01 | 2.9e+01 | 68 |
| fr | 2002_08 | 1jv1:A | 11.3 | 1.2 | -2.851732e+00 | 5.145253e+00 | 5.1e+00 | 1.1e+01 | 4.3e+01 | 1.50e-01 | 4.9e+00 | 6.5e+00 | 490 |
| fr | 2002_08 | 1koz:A | 4.7 | 3.1 | 1.784869e+01 | 1.429624e+01 | 7.5e+01 | 8.3e+01 | 9.2e+01 | 5.90e-01 | 7.8e+01 | 8.6e+01 | 36 |
| fr | 2002_08 | 1l7y:A | 10.8 | 4.1 | 1.190014e+01 | 1.289323e+01 | 5.7e+01 | 6.9e+01 | 8.4e+01 | 2.13e+00 | 6.7e+01 | 7.2e+01 | 94 |
| fr | 2002_08 | 1l8d:A | 4.0 | 4.1 | -6.940909e+00 | 1.818901e+01 | 0.0e+00 | 0.0e+00 | 8.5e+01 | 3.08e-01 | 4.3e+01 | 4.2e+01 | 103 |
| fr | 2002_08 | 1lmz:A | 10.2 | 3.3 | 7.725221e+00 | 2.932224e+00 | 1.1e+01 | 1.9e+01 | 8.8e+01 | 3.63e-01 | 2.6e+01 | 3.9e+01 | 187 |
| fr | 2002_08 | 1lup:A | 3.9 | 2.8 | 1.161465e+01 | 1.123558e+01 | 7.4e+01 | 8.4e+01 | 9.4e+01 | 3.69e+01 | 7.7e+01 | 8.4e+01 | 31 |
| fr | 2002_08 | 1m44:B | 13.9 | 5.2 | -8.308251e-01 | 1.525543e+01 | 3.1e+01 | 4.0e+01 | 8.4e+01 | 4.81e-03 | 5.6e+01 | 6.0e+01 | 180 |
| fr | 2002_08 | 1m55:A | 2.7 | 2.3 | -1.719005e+00 | 3.075437e+00 | 5.2e-01 | 3.1e+00 | 6.2e+01 | 2.33e+00 | 1.3e+01 | 1.7e+01 | 193 |
| fr | 2002_08 | 1mb6:A | 4.7 | 2.8 | 2.502688e+01 | 2.195231e+01 | 9.1e+01 | 9.4e+01 | 9.4e+01 | 4.72e-01 | 9.1e+01 | 9.4e+01 | 35 |
| fr | 2002_08 | THIS_month:psum | 5.0 | 2.5 | 9.1 | 8.5 | 26.9 | 33.8 | 79 | 3.7 | 41.3 | 47.0 | 168.5 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |