| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2002_07 | THIS_month:psum | 3.7 | 2.7 | 19.2 | 8.6 | 14.7 | 19.0 | 45.1 | 1.8 | 26.5 | 28.9 | 182.8 |
| fr | 2002_07 | 1ifr:A | 2.2 | 1.2 | -8.367123e+00 | -1.064166e+00 | 1.8e+00 | 5.3e+00 | 6.5e+01 | 0.73 | 1.8e+01 | 1.9e+01 | 113 |
| fr | 2002_07 | 1ify:A | 5.7 | 3.9 | -1.566154e+01 | 2.189808e+01 | 8.0e+01 | 8.0e+01 | 8.0e+01 | 0.12 | 8.0e+01 | 8.0e+01 | 49 |
| fr | 2002_07 | 1iqo:A | 2.3 | 2.3 | -8.851886e+00 | -1.318490e+00 | 2.3e+00 | 9.1e+00 | 7.8e+01 | 0.25 | 2.4e+01 | 2.7e+01 | 88 |
| fr | 2002_07 | 1iu1:A | 4.9 | 3.1 | -1.018000e+01 | 2.360716e+00 | 2.0e+01 | 2.8e+01 | 5.0e+01 | 0.50 | 2.8e+01 | 3.2e+01 | 120 |
| fr | 2002_07 | 1j5s:B | 2.5 | 3.3 | -1.168396e-01 | 1.401979e+00 | 1.6e+00 | 4.0e+00 | 1.2e+01 | 2.4 | 6.0e+00 | 6.4e+00 | 450 |
| fr | 2002_07 | 1j5u:A | 13.1 | 4.6 | -5.173058e+00 | 1.092810e+01 | 3.5e+01 | 4.9e+01 | 9.0e+01 | 0.10 | 6.6e+01 | 7.7e+01 | 125 |
| fr | 2002_07 | 1j5w:A | 1.1 | 2.0 | -1.527000e+01 | -1.743751e+00 | 3.0e+00 | 4.8e+00 | 1.5e+01 | 4.9 | 8.1e+00 | 1.0e+01 | 270 |
| fr | 2002_07 | 1jkv:A | 1.9 | 2.3 | -3.276065e+00 | -6.964538e-01 | 1.1e+00 | 3.0e+00 | 4.4e+01 | 1.9 | 9.8e+00 | 1.1e+01 | 266 |
| fr | 2002_07 | 1jmm:A | 1.6 | 1.2 | -9.116418e+00 | -8.070958e-01 | 3.2e+00 | 4.6e+00 | 1.8e+01 | 1.8 | 5.4e+00 | 7.3e+00 | 370 |
| fr | 2002_07 | 1k0h:A | 1.8 | 2.6 | -1.356999e+01 | -4.493888e+00 | 3.4e+00 | 7.7e+00 | 3.8e+01 | 3.1 | 1.8e+01 | 2.4e+01 | 117 |
| fr | 2002_07 | 1key:D | 3.8 | 3.3 | -9.116418e+00 | 4.368765e+00 | 4.7e-01 | 9.5e-01 | 3.2e+01 | 0.44 | 2.2e+01 | 2.4e+01 | 211 |
| fr | 2002_07 | 1kmi:Z | 3.8 | 3.1 | 1.922935e+01 | 4.779982e+00 | 2.3e+00 | 7.3e+00 | 2.5e+01 | 1.5 | 1.4e+01 | 1.5e+01 | 177 |
| fr | 2002_07 | 1kn6:A | 3.5 | 2.3 | -1.695287e+01 | -7.105705e+00 | 5.5e+00 | 1.5e+01 | 4.9e+01 | 3.6 | 2.9e+01 | 3.0e+01 | 73 |
| fr | 2002_07 | 1kq2:A | 5.8 | 4.1 | -1.454284e+01 | 2.300961e+01 | 6.0e+01 | 6.3e+01 | 7.0e+01 | 3.7 | 6.2e+01 | 6.2e+01 | 60 |
| fr | 2002_07 | 1kzq:A | 2.2 | 2.3 | -2.104452e+01 | 8.248396e-01 | 2.0e+00 | 4.7e+00 | 1.1e+01 | 2.5 | 7.5e+00 | 9.1e+00 | 253 |
| fr | 2002_07 | THIS_month:psum | 3.7 | 2.7 | 19.2 | 8.6 | 14.7 | 19.0 | 45.1 | 1.8 | 26.5 | 28.9 | 182.8 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |