| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2002_07 | THIS_month:psum | 2.3 | 1.4 | 11.1 | 11.2 | 13.6 | 37.0 | 1.8 | 17.9 | 20.9 | 182.8 | |
| fr | 2002_07 | 1ifr:A | 1.6 | 1.2 | -1.090714e+01 | -3.213468e+00 | 1.8e+00 | 5.3e+00 | 5.0e+01 | 0.73 | 9.7e+00 | 1.4e+01 | 113 |
| fr | 2002_07 | 1ify:A | 5.7 | 3.9 | -1.566154e+01 | 2.189808e+01 | 8.0e+01 | 8.0e+01 | 8.0e+01 | 0.12 | 8.0e+01 | 8.0e+01 | 49 |
| fr | 2002_07 | 1iqo:A | 2.3 | 2.0 | -1.130699e+01 | -1.460366e+00 | 2.3e+00 | 9.1e+00 | 6.1e+01 | 0.25 | 1.7e+01 | 2.6e+01 | 88 |
| fr | 2002_07 | 1iu1:A | 0.9 | 0.0 | -1.090714e+01 | -4.672399e+00 | 0.0e+00 | 1.7e+00 | 4.7e+01 | 0.50 | 1.1e+01 | 1.8e+01 | 120 |
| fr | 2002_07 | 1j5s:B | 1.3 | 1.2 | -1.151960e+01 | -1.023232e+00 | 6.7e-01 | 1.1e+00 | 1.2e+01 | 2.4 | 2.2e+00 | 5.1e+00 | 450 |
| fr | 2002_07 | 1j5u:A | 13.1 | 4.6 | -5.173058e+00 | 1.092810e+01 | 3.5e+01 | 4.9e+01 | 9.0e+01 | 0.10 | 6.6e+01 | 7.7e+01 | 125 |
| fr | 2002_07 | 1j5w:A | 0.2 | 0 | -2.776364e+01 | -2.251417e+00 | 3.0e+00 | 4.4e+00 | 8.1e+00 | 4.9 | 0.0e+00 | 0.0e+00 | 270 |
| fr | 2002_07 | 1jkv:A | 1.0 | 1.6 | -9.372249e+00 | -1.176205e+00 | 7.5e-01 | 1.9e+00 | 1.9e+01 | 1.9 | 6.0e+00 | 8.6e+00 | 266 |
| fr | 2002_07 | 1jmm:A | 1.0 | 0 | -1.650811e+01 | -8.070958e-01 | 8.1e-01 | 2.4e+00 | 1.0e+01 | 1.8 | 0.0e+00 | 0.0e+00 | 370 |
| fr | 2002_07 | 1k0h:A | 1.2 | 1.2 | -1.607283e+01 | -4.751975e+00 | 8.5e-01 | 1.7e+00 | 3.2e+01 | 3.1 | 1.3e+01 | 1.6e+01 | 117 |
| fr | 2002_07 | 1key:D | -0.0 | 0 | -9.116418e+00 | -2.894787e+00 | 0.0e+00 | 0.0e+00 | 3.2e+01 | 0.44 | 0.0e+00 | 0.0e+00 | 211 |
| fr | 2002_07 | 1kmi:Z | 1.9 | 2.3 | -1.372696e+01 | -3.449282e+00 | 5.6e-01 | 2.8e+00 | 2.5e+01 | 1.5 | 1.0e+01 | 1.3e+01 | 177 |
| fr | 2002_07 | 1kn6:A | 1.2 | 1.2 | -2.036000e+01 | -8.366469e+00 | 5.5e+00 | 6.8e+00 | 4.1e+01 | 3.6 | 1.6e+01 | 1.8e+01 | 73 |
| fr | 2002_07 | 1kq2:A | 2.7 | 2.8 | -2.655652e+01 | 1.168440e+01 | 3.7e+01 | 3.7e+01 | 3.8e+01 | 3.7 | 3.8e+01 | 3.8e+01 | 60 |
| fr | 2002_07 | 1kzq:A | 1.5 | 0 | -2.348130e+01 | 1.975389e-01 | 7.9e-01 | 1.6e+00 | 1.0e+01 | 2.5 | 0.0e+00 | 0.0e+00 | 253 |
| fr | 2002_07 | THIS_month:psum | 2.3 | 1.4 | 11.1 | 11.2 | 13.6 | 37.0 | 1.8 | 17.9 | 20.9 | 182.8 | |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |