| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2002_07 | THIS_month:psum | 6.0 | 3.3 | 12.5 | 12.7 | 21.9 | 31.0 | 87.2 | 2.7 | 46.1 | 50.6 | 158.2 |
| fr | 2002_07 | 1ifr:A | 5.4 | 2.6 | -5.988235e+00 | 6.927607e+00 | 6.2e+00 | 1.2e+01 | 9.0e+01 | 3.26e+00 | 4.0e+01 | 5.0e+01 | 113 |
| fr | 2002_07 | 1ify:A | 5.9 | 3.9 | -1.357333e+01 | 1.961437e+01 | 7.8e+01 | 8.0e+01 | 9.2e+01 | 1.17e+00 | 8.0e+01 | 8.0e+01 | 49 |
| fr | 2002_07 | 1iqo:A | 2.8 | 2.3 | -7.043114e+00 | -2.473928e+00 | 4.5e+00 | 9.1e+00 | 9.5e+01 | 2.70e+00 | 3.6e+01 | 4.0e+01 | 88 |
| fr | 2002_07 | 1iu1:A | 14.5 | 4.9 | -5.311304e+00 | 2.132839e+01 | 4.8e+01 | 6.2e+01 | 9.6e+01 | 1.33e-04 | 8.2e+01 | 8.6e+01 | 120 |
| fr | 2002_07 | 1j5s:B | 3.5 | 3.1 | 2.751414e+00 | 3.333745e-01 | 1.8e+00 | 2.7e+00 | 7.2e+01 | 1.95e+00 | 1.5e+01 | 2.0e+01 | 450 |
| fr | 2002_07 | 1jkv:A | 16.2 | 3.9 | 1.807217e+01 | 1.346718e+01 | 3.2e+01 | 3.7e+01 | 5.9e+01 | 8.64e-02 | 4.5e+01 | 4.8e+01 | 266 |
| fr | 2002_07 | 1k0h:A | 1.6 | 2.0 | -6.498959e+00 | -2.616682e+00 | 2.6e+00 | 8.5e+00 | 7.9e+01 | 5.29e+00 | 2.4e+01 | 3.2e+01 | 117 |
| fr | 2002_07 | 1key:D | 4.8 | 3.9 | 4.632422e+00 | 6.998981e+00 | 9.5e-01 | 2.8e+00 | 8.6e+01 | 7.71e-01 | 3.1e+01 | 3.5e+01 | 211 |
| fr | 2002_07 | 1kmi:Z | 4.1 | 4.2 | 7.095214e+00 | 7.243350e+00 | 1.1e+00 | 1.7e+00 | 9.2e+01 | 1.89e+00 | 3.5e+01 | 3.7e+01 | 177 |
| fr | 2002_07 | 1kn6:A | 3.7 | 2.6 | -7.632872e+00 | 1.499694e+00 | 1.1e+01 | 2.9e+01 | 1.0e+02 | 3.14e+00 | 4.8e+01 | 5.1e+01 | 73 |
| fr | 2002_07 | 1kq2:A | 6.5 | 3.9 | -1.035150e+01 | 2.766565e+01 | 4.7e+01 | 6.2e+01 | 9.8e+01 | 2.00e+00 | 7.7e+01 | 8.0e+01 | 60 |
| fr | 2002_07 | 1kzq:A | 6.5 | 2.6 | -2.316438e+00 | 4.011838e-01 | 3.6e+00 | 1.4e+01 | 9.5e+01 | 1.17e+00 | 1.7e+01 | 2.5e+01 | 253 |
| fr | 2002_07 | 1lj2:A | 5.1 | 3.3 | -6.567742e+00 | 9.403003e+00 | 9.4e-01 | 4.7e+00 | 8.8e+01 | 6.46e+00 | 3.9e+01 | 4.3e+01 | 106 |
| fr | 2002_07 | 1lm7:A | 3.1 | 2.3 | -3.181250e+00 | -5.201849e-01 | 2.9e+00 | 5.9e+00 | 8.1e+01 | 3.51e-01 | 1.8e+01 | 2.2e+01 | 238 |
| fr | 2002_07 | 1lqr:A | 4.7 | 3.9 | 2.746166e+01 | 2.299427e+01 | 9.4e+01 | 9.4e+01 | 9.4e+01 | 1.82e+01 | 9.4e+01 | 9.4e+01 | 35 |
| fr | 2002_07 | 1lvf:A | 11.0 | 4.7 | 1.528243e+01 | 1.988790e+01 | 1.2e+01 | 5.5e+01 | 9.6e+01 | 8.20e-01 | 6.7e+01 | 7.6e+01 | 106 |
| fr | 2002_07 | 1lvo:A | 1.4 | 2.3 | -3.333534e+00 | -8.763799e-01 | 1.3e+00 | 2.0e+00 | 5.7e+01 | 6.99e-01 | 1.2e+01 | 1.8e+01 | 299 |
| fr | 2002_07 | 1m62:A | 8.1 | 4.6 | -7.020690e+00 | 2.106599e+01 | 4.7e+01 | 7.7e+01 | 1.0e+02 | 2.59e-01 | 7.0e+01 | 7.5e+01 | 87 |
| fr | 2002_07 | THIS_month:psum | 6.0 | 3.3 | 12.5 | 12.7 | 21.9 | 31.0 | 87.2 | 2.7 | 46.1 | 50.6 | 158.2 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |