| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2002_06 | THIS_month:psum | 1.7 | 1.6 | 11.2 | 7.6 | 11.9 | 49.6 | 6.2 | 20.3 | 24.5 | 133.9 | |
| fr | 2002_06 | 1gty:A | 1.6 | 0.0 | -1.970323e+01 | -5.476181e+00 | 3.8e+00 | 8.8e+00 | 3.9e+01 | 3.2 | 1.2e+01 | 1.9e+01 | 80 |
| fr | 2002_06 | 1k8v:A | 0.7 | 1.6 | -1.796471e+01 | -1.566154e+01 | 0.0e+00 | 7.7e+00 | 8.7e+01 | 29 | 3.1e+01 | 3.6e+01 | 39 |
| fr | 2002_06 | 1kmd:A | 1.4 | 2.3 | -8.476922e+00 | -9.740612e-01 | 1.7e+00 | 3.4e+00 | 6.2e+01 | 2.7 | 8.5e+00 | 1.5e+01 | 117 |
| fr | 2002_06 | 1kw4:A | 8.7 | 3.7 | -9.987776e+00 | 1.484440e+01 | 6.5e+01 | 7.6e+01 | 9.0e+01 | 1e-08 | 7.5e+01 | 7.9e+01 | 68 |
| fr | 2002_06 | 1l1o:C | 0.6 | 1.2 | -1.001311e+01 | -2.483325e+00 | 2.3e+00 | 4.0e+00 | 3.5e+01 | 1.6 | 1.1e+01 | 1.6e+01 | 173 |
| fr | 2002_06 | 1l2p:A | 1.2 | 2.3 | -1.299574e+01 | 7.754561e+00 | 0.0e+00 | 1.6e+00 | 7.7e+01 | 0.49 | 2.6e+01 | 2.8e+01 | 61 |
| fr | 2002_06 | 1l2r:A | 1.0 | 2.0 | -1.696666e+01 | -3.344416e-01 | 2.2e-01 | 1.3e+00 | 7.9e+00 | 0.65 | 3.9e+00 | 4.2e+00 | 457 |
| fr | 2002_06 | 1l2w:I | 0.7 | 1.2 | -2.655652e+01 | -1.071579e+01 | 3.5e+00 | 1.4e+01 | 4.0e+01 | 9.4 | 2.3e+01 | 2.3e+01 | 57 |
| fr | 2002_06 | 1l3a:A | 0.7 | 1.2 | -9.249793e+00 | -3.604217e+00 | 0.0e+00 | 6.0e-01 | 4.0e+01 | 1.5 | 5.4e+00 | 1.3e+01 | 166 |
| fr | 2002_06 | 1l6p:A | 0.4 | 0.7 | -2.655652e+01 | -5.047865e+00 | 0.0e+00 | 1.7e+00 | 1.9e+01 | 14 | 7.4e+00 | 1.2e+01 | 121 |
| fr | 2002_06 | THIS_month:psum | 1.7 | 1.6 | 11.2 | 7.6 | 11.9 | 49.6 | 6.2 | 20.3 | 24.5 | 133.9 | |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |