| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2002_06 | THIS_month:psum | 5.6 | 2.9 | 10.7 | 9.0 | 21 | 30.0 | 88.3 | 4.1 | 40.8 | 46.7 | 162.8 |
| fr | 2002_06 | 1gty:A | 6.0 | 3.1 | -8.357117e+00 | 3.072929e+00 | 1.2e+01 | 3.8e+01 | 9.1e+01 | 8.77e+00 | 4.9e+01 | 6.1e+01 | 80 |
| fr | 2002_06 | 1kmd:A | 10.9 | 3.3 | -4.771488e-01 | 9.970469e+00 | 4.5e+01 | 6.0e+01 | 9.7e+01 | 2.53e-04 | 6.5e+01 | 7.3e+01 | 117 |
| fr | 2002_06 | 1l1o:C | 6.4 | 2.0 | -4.045033e+00 | 4.788133e+00 | 5.8e-01 | 5.8e+00 | 8.7e+01 | 1.65e-04 | 4.2e+01 | 4.6e+01 | 173 |
| fr | 2002_06 | 1l2p:A | 6.1 | 4.7 | -1.454286e+01 | 2.755894e+01 | 6.2e+01 | 6.6e+01 | 6.9e+01 | 7.66e+00 | 6.6e+01 | 6.6e+01 | 61 |
| fr | 2002_06 | 1l2r:A | 2.0 | 2.3 | 1.571464e+00 | 1.345304e-01 | 1.3e+00 | 3.3e+00 | 7.2e+01 | 3.64e-01 | 1.4e+01 | 1.7e+01 | 457 |
| fr | 2002_06 | 1l2w:I | 0.8 | 2.3 | -1.071579e+01 | -9.305976e+00 | 1.8e+00 | 8.8e+00 | 1.0e+02 | 1.51e+01 | 3.2e+01 | 4.2e+01 | 57 |
| fr | 2002_06 | 1l3a:A | 1.6 | 2.0 | -3.865799e+00 | 5.868333e-01 | 1.8e+00 | 6.0e+00 | 9.5e+01 | 1.44e+00 | 1.6e+01 | 2.3e+01 | 166 |
| fr | 2002_06 | 1l6p:A | 6.9 | 3.1 | -4.807929e+00 | 5.494981e+00 | 2.0e+01 | 3.7e+01 | 8.8e+01 | 1.24e+01 | 5.2e+01 | 5.4e+01 | 121 |
| fr | 2002_06 | 1l8y:A | 10.6 | 4.7 | 1.307462e+01 | 1.276330e+01 | 5.7e+01 | 7.7e+01 | 9.8e+01 | 4.97e-06 | 6.5e+01 | 7.5e+01 | 84 |
| fr | 2002_06 | 1l9v:A | 1.7 | 2.3 | -9.749144e-01 | -9.060530e-01 | 3.2e-01 | 1.6e+00 | 8.2e+01 | 7.40e-02 | 1.2e+01 | 1.6e+01 | 313 |
| fr | 2002_06 | 1lrh:A | 14.0 | 4.1 | 1.752226e+01 | 1.672482e+01 | 4.9e+01 | 5.5e+01 | 9.3e+01 | 2.26e+00 | 6.0e+01 | 6.4e+01 | 160 |
| fr | 2002_06 | 1luo:A | 1.2 | 2.0 | -4.002137e+00 | -1.805475e+00 | 1.2e+00 | 2.4e+00 | 8.8e+01 | 1.86e+00 | 1.7e+01 | 2.4e+01 | 165 |
| fr | 2002_06 | THIS_month:psum | 5.6 | 2.9 | 10.7 | 9.0 | 21 | 30.0 | 88.3 | 4.1 | 40.8 | 46.7 | 162.8 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |