| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2002_05 | THIS_month:psum | 3.1 | 2.2 | 2.1 | 8.1 | 9.4 | 18.8 | 47.2 | 11.1 | 26.0 | 29.9 | 126.7 |
| fr | 2002_05 | 1cix:A | 0.1 | 1.2 | -1.650811e+01 | -1.388182e+01 | 0.0e+00 | 6.8e+00 | 8.4e+01 | 101 | 1.4e+01 | 2.3e+01 | 44 |
| fr | 2002_05 | 1go4:G | 5.4 | 4.4 | -1.650811e+01 | 1.274502e+01 | 3.4e+01 | 3.6e+01 | 3.7e+01 | 4.4 | 3.6e+01 | 3.6e+01 | 100 |
| fr | 2002_05 | 1gw5:S | 2.7 | 3.3 | -2.985092e+00 | 1.085836e+00 | 9.2e+00 | 2.3e+01 | 3.2e+01 | 12 | 2.2e+01 | 2.5e+01 | 142 |
| fr | 2002_05 | 1iko:P | 0.5 | 0.0 | -1.696667e+01 | -4.287250e+00 | 2.1e+00 | 6.4e+00 | 2.6e+01 | 4.4 | 8.5e+00 | 1.2e+01 | 141 |
| fr | 2002_05 | 1jni:A | 0.2 | 1.6 | -1.527000e+01 | -8.716373e+00 | 9.7e+00 | 2.9e+01 | 6.5e+01 | 0.01 | 2.6e+01 | 4.2e+01 | 62 |
| fr | 2002_05 | 1k3r:A | 0.8 | 2.0 | -2.106207e+01 | -2.330271e+00 | 3.8e-01 | 1.1e+00 | 1.1e+01 | 2.1 | 4.6e+00 | 5.7e+00 | 262 |
| fr | 2002_05 | 1k45:A | 0.3 | 0.0 | -1.607366e+01 | -3.445626e+00 | 1.2e+00 | 4.2e+00 | 2.3e+01 | 1.3 | 6.0e+00 | 1.0e+01 | 168 |
| fr | 2002_05 | 1kjy:D | 1.1 | 2.6 | -1.850909e+01 | -1.140143e+00 | 5.9e+00 | 2.9e+01 | 9.7e+01 | 8.6 | 6.5e+01 | 6.5e+01 | 34 |
| fr | 2002_05 | 1ko8:A | 18.1 | 5.9 | 2.184940e+00 | 1.347154e+01 | 4.6e+01 | 7.0e+01 | 9.7e+01 | 9e-24 | 7.0e+01 | 7.6e+01 | 172 |
| fr | 2002_05 | 1kpp:A | 10.8 | 4.4 | -4.680961e+00 | 1.256963e+01 | 1.7e+01 | 2.8e+01 | 7.8e+01 | 6e-27 | 6.1e+01 | 6.4e+01 | 144 |
| fr | 2002_05 | 1ksj:B | 0.8 | 1.2 | -1.650811e+01 | -4.362833e+00 | 2.2e+00 | 5.1e+00 | 2.7e+01 | 1.4 | 1.2e+01 | 1.5e+01 | 138 |
| fr | 2002_05 | 1kuu:A | 1.8 | 2.3 | -2.034702e+01 | -2.422292e+00 | 3.0e+00 | 5.0e+00 | 1.5e+01 | 4.0 | 7.9e+00 | 8.9e+00 | 202 |
| fr | 2002_05 | 1kv4:A | 0.5 | 0.7 | -2.545000e+01 | -1.454286e+01 | 4.8e+00 | 2.4e+01 | 5.7e+01 | 23 | 3.1e+01 | 3.3e+01 | 42 |
| fr | 2002_05 | 1l1d:A | 1.2 | 1.2 | -2.262222e+01 | -4.301329e+00 | 4.9e+00 | 9.9e+00 | 1.9e+01 | 4.0 | 9.2e+00 | 1.3e+01 | 142 |
| fr | 2002_05 | 1l1s:A | 2.3 | 2.8 | -1.383332e+01 | 7.576862e-01 | 9.3e-01 | 4.6e+00 | 4.1e+01 | 1.5 | 1.7e+01 | 2.1e+01 | 108 |
| fr | 2002_05 | THIS_month:psum | 3.1 | 2.2 | 2.1 | 8.1 | 9.4 | 18.8 | 47.2 | 11.1 | 26.0 | 29.9 | 126.7 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |