| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2002_05 | THIS_month:psum | 6.4 | 3.1 | 6.2 | 8.3 | 17.2 | 26.8 | 83.2 | 4.7 | 40.7 | 45.2 | 157.3 |
| fr | 2002_05 | 1cix:A | 2.3 | 2.3 | 2.146481e+00 | -2.401222e+00 | 5.5e+01 | 6.4e+01 | 8.2e+01 | 2.37e+01 | 6.4e+01 | 6.6e+01 | 44 |
| fr | 2002_05 | 1go4:G | 5.0 | 4.2 | -6.567742e+00 | 1.938234e+01 | 1.0e+00 | 7.0e+00 | 9.3e+01 | 5.46e+00 | 4.4e+01 | 4.5e+01 | 100 |
| fr | 2002_05 | 1gw5:S | 13.5 | 5.5 | 9.213190e+00 | 1.365172e+01 | 3.7e+01 | 5.5e+01 | 8.6e+01 | 2.20e-01 | 6.1e+01 | 6.8e+01 | 142 |
| fr | 2002_05 | 1iko:P | 8.3 | 2.6 | -4.828842e+00 | 1.287547e+01 | 2.8e+01 | 4.4e+01 | 8.9e+01 | 2.90e+00 | 5.7e+01 | 5.8e+01 | 141 |
| fr | 2002_05 | 1jni:A | 1.4 | 1.6 | -9.543719e+00 | -7.855088e+00 | 6.5e+00 | 1.9e+01 | 1.0e+02 | 2.60e+00 | 3.2e+01 | 3.4e+01 | 62 |
| fr | 2002_05 | 1k3r:A | 7.9 | 3.1 | 1.426859e+01 | 3.625464e+00 | 1.3e+01 | 1.8e+01 | 5.1e+01 | 1.33e-01 | 1.5e+01 | 1.8e+01 | 262 |
| fr | 2002_05 | 1k45:A | 12.9 | 5.3 | 9.446473e+00 | 1.111247e+01 | 3.3e+01 | 4.7e+01 | 8.6e+01 | 1.13e-05 | 6.2e+01 | 7.2e+01 | 168 |
| fr | 2002_05 | 1ko8:A | 17.1 | 5.6 | 4.724151e+00 | 1.587156e+01 | 6.2e+01 | 6.9e+01 | 1.0e+02 | 5.87e-04 | 7.1e+01 | 7.8e+01 | 172 |
| fr | 2002_05 | 1kpp:A | 13.9 | 4.4 | -1.995734e+00 | 1.336568e+01 | 1.8e+01 | 3.3e+01 | 8.8e+01 | 1.77e-05 | 6.1e+01 | 6.6e+01 | 144 |
| fr | 2002_05 | 1kuu:A | 12.0 | 3.1 | 3.283187e+00 | 8.814525e+00 | 1.5e+01 | 3.2e+01 | 8.9e+01 | 1.10e+00 | 5.0e+01 | 5.8e+01 | 202 |
| fr | 2002_05 | 1kv4:A | 3.6 | 2.6 | -1.385299e+01 | 1.173866e+01 | 3.1e+01 | 5.0e+01 | 1.0e+02 | 3.23e+01 | 6.9e+01 | 7.1e+01 | 42 |
| fr | 2002_05 | 1ldv:A | 1.3 | 2.8 | -3.568478e+00 | -1.398435e+00 | 3.8e-01 | 1.9e+00 | 6.4e+01 | 5.66e-02 | 1.0e+01 | 1.3e+01 | 264 |
| fr | 2002_05 | 1lgj:A | 2.6 | 2.6 | -1.111529e-01 | 3.216438e+00 | 1.8e+00 | 4.2e+00 | 8.5e+01 | 4.32e-04 | 2.3e+01 | 2.5e+01 | 168 |
| fr | 2002_05 | 1lgo:A | 4.8 | 3.3 | 4.641681e+00 | 4.500931e+00 | 3.2e+00 | 7.7e+00 | 8.1e+01 | 3.20e+00 | 2.8e+01 | 3.3e+01 | 155 |
| fr | 2002_05 | 1lgz:A | 2.2 | 2.8 | 7.632078e-01 | 1.477915e+00 | 9.8e+00 | 2.0e+01 | 8.9e+01 | 9.87e+00 | 4.0e+01 | 4.8e+01 | 82 |
| fr | 2002_05 | 1li1:A | 2.3 | 1.6 | -3.175929e+00 | -4.387355e-01 | 1.8e+00 | 3.1e+00 | 8.4e+01 | 1.46e+00 | 1.2e+01 | 1.8e+01 | 228 |
| fr | 2002_05 | 1lk8:A | 5.2 | 2.6 | -3.334639e+00 | 2.829985e+00 | 1.3e+00 | 2.6e+00 | 5.9e+01 | 1.44e-01 | 1.4e+01 | 1.9e+01 | 306 |
| fr | 2002_05 | 1ln4:A | 6.1 | 3.1 | 5.789517e+00 | 4.283397e+00 | 2.2e+01 | 4.7e+01 | 9.5e+01 | 1.40e+00 | 5.5e+01 | 6.1e+01 | 98 |
| fr | 2002_05 | 1lpl:A | 2.7 | 0.7 | -7.185882e+00 | 4.990982e-01 | 5.3e+00 | 1.1e+01 | 8.9e+01 | 7.99e+00 | 2.5e+01 | 3.2e+01 | 95 |
| fr | 2002_05 | 1lu7:A | 3.9 | 3.9 | 8.255015e+00 | 5.698716e+00 | 0.0e+00 | 7.4e-01 | 5.5e+01 | 2.44e+00 | 2.2e+01 | 2.2e+01 | 272 |
| fr | 2002_05 | THIS_month:psum | 6.4 | 3.1 | 6.2 | 8.3 | 17.2 | 26.8 | 83.2 | 4.7 | 40.7 | 45.2 | 157.3 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |