| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_04 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2002_04 | THIS_month:psum | 4.6 | 2.6 | 7.1 | 22.6 | 30.5 | 52.5 | 6.5 | 31.7 | 35.1 | 148 | |
| fr | 2002_04 | 1gqw:A | 23.5 | 5.6 | -1.368239e+00 | 1.391989e+01 | 4.0e+01 | 5.3e+01 | 8.1e+01 | 2e-19 | 6.3e+01 | 6.8e+01 | 277 |
| fr | 2002_04 | 1hll:A | 1.8 | 2.6 | -3.214737e+01 | -1.908750e+01 | 5.0e+01 | 5.6e+01 | 5.9e+01 | 2.8 | 5.3e+01 | 5.3e+01 | 32 |
| fr | 2002_04 | 1icz:A | 1.5 | 1.6 | -1.130462e+01 | -2.298470e+00 | 2.4e+00 | 4.4e+00 | 2.2e+01 | 8.5 | 8.8e+00 | 1.2e+01 | 249 |
| fr | 2002_04 | 1k1v:A | 1.9 | 2.8 | -2.655652e+01 | -1.252925e+00 | 4.1e+01 | 5.1e+01 | 5.6e+01 | 19 | 4.4e+01 | 4.4e+01 | 41 |
| fr | 2002_04 | 1k3b:A | 0.6 | 0.7 | -1.130151e+01 | -4.717473e+00 | 8.4e-01 | 2.5e+00 | 4.5e+01 | 4.9 | 1.4e+01 | 1.7e+01 | 119 |
| fr | 2002_04 | 1k81:A | 3.3 | 2.3 | -2.349231e+01 | -1.529654e-02 | 3.6e+01 | 6.4e+01 | 7.2e+01 | 2.8 | 4.4e+01 | 5.0e+01 | 36 |
| fr | 2002_04 | 1k8b:A | 3.4 | 2.3 | -1.454286e+01 | -7.890328e+00 | 3.1e+01 | 3.8e+01 | 8.1e+01 | 8.8 | 3.8e+01 | 4.4e+01 | 52 |
| fr | 2002_04 | 1kxl:A | 3.1 | 2.8 | -1.489756e+01 | 4.570855e-01 | 1.6e+00 | 3.2e+00 | 2.2e+01 | 3.6 | 1.3e+01 | 1.6e+01 | 187 |
| fr | 2002_04 | 1l7k:A | 2.7 | 2.8 | -5.171407e+00 | -2.358648e-01 | 1.2e+00 | 2.7e+00 | 3.5e+01 | 8.5 | 8.0e+00 | 1.2e+01 | 339 |
| fr | 2002_04 | THIS_month:psum | 4.6 | 2.6 | 7.1 | 22.6 | 30.5 | 52.5 | 6.5 | 31.7 | 35.1 | 148 | |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |