| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_04 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2002_04 | THIS_month:psum | 3.7 | 1.9 | 4.4 | 10.7 | 17.8 | 73.9 | 6.9 | 25.1 | 31.6 | 153.2 | |
| fr | 2002_04 | 1gqw:A | 17.9 | 3.9 | -2.439805e+00 | 1.278437e+01 | 2.9e+01 | 4.1e+01 | 8.8e+01 | 7.51e-06 | 6.0e+01 | 6.5e+01 | 277 |
| fr | 2002_04 | 1hll:A | 0.8 | 0 | -4.362857e+01 | -1.908750e+01 | 4.1e+01 | 4.4e+01 | 4.4e+01 | 9.20e+00 | 0.0e+00 | 0.0e+00 | 32 |
| fr | 2002_04 | 1icz:A | 8.4 | 2.3 | -4.199715e-01 | 1.269807e-01 | 1.6e+00 | 4.0e+00 | 9.1e+01 | 5.02e-01 | 2.6e+01 | 4.0e+01 | 249 |
| fr | 2002_04 | 1k1v:A | 3.2 | 2.6 | -1.607368e+01 | -1.034870e+01 | 2.4e+01 | 5.6e+01 | 9.3e+01 | 1.26e+01 | 5.6e+01 | 6.3e+01 | 41 |
| fr | 2002_04 | 1k3b:A | 0.7 | 2.0 | -7.080737e+00 | -2.938545e+00 | 0.0e+00 | 8.4e-01 | 7.2e+01 | 6.24e+00 | 1.8e+01 | 2.4e+01 | 119 |
| fr | 2002_04 | 1k81:A | 0.4 | 0.7 | -1.850909e+01 | -1.695154e+01 | 8.3e+00 | 1.1e+01 | 9.2e+01 | 7.04e+00 | 3.1e+01 | 3.9e+01 | 36 |
| fr | 2002_04 | 1k8b:A | 2.6 | 2.6 | -1.696667e+01 | -1.161669e+01 | 9.6e+00 | 2.1e+01 | 6.9e+01 | 1.02e+01 | 3.7e+01 | 3.8e+01 | 52 |
| fr | 2002_04 | 1kxl:A | 1.9 | 1.2 | -4.441510e+00 | -2.291429e+00 | 5.3e-01 | 1.6e+00 | 7.3e+01 | 3.02e+00 | 1.4e+01 | 2.4e+01 | 187 |
| fr | 2002_04 | 1l7k:A | 1.2 | 1.6 | -4.088010e+00 | 3.130834e-01 | 2.9e-01 | 1.2e+00 | 4.2e+01 | 3.65e+00 | 9.7e+00 | 1.3e+01 | 339 |
| fr | 2002_04 | 1l8c:B | 0.7 | 1.6 | -1.388182e+01 | -1.184520e+01 | 3.9e+00 | 1.6e+01 | 8.6e+01 | 2.36e+01 | 9.8e+00 | 2.2e+01 | 51 |
| fr | 2002_04 | 1l8m:A | 3.4 | 2.6 | -3.186079e+00 | -3.587287e-01 | 0.0e+00 | 0.0e+00 | 6.3e+01 | 1.34e-01 | 1.5e+01 | 2.0e+01 | 303 |
| fr | 2002_04 | THIS_month:psum | 3.7 | 1.9 | 4.4 | 10.7 | 17.8 | 73.9 | 6.9 | 25.1 | 31.6 | 153.2 | |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |