| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2002_03 | THIS_month:psum | 3.0 | 2.4 | 21.0 | 13.0 | 16.1 | 20.1 | 50.4 | 9.5 | 27.1 | 29.8 | 137.2 |
| fr | 2002_03 | 1gk7:A | 1.6 | 2.6 | -1.970323e+01 | -1.566154e+01 | 4.4e+01 | 4.6e+01 | 7.9e+01 | 18 | 4.1e+01 | 4.4e+01 | 39 |
| fr | 2002_03 | 1ib8:A | 2.9 | 2.6 | -3.300642e+00 | 1.486385e+00 | 3.0e+00 | 4.9e+00 | 7.6e+01 | 1.6 | 1.9e+01 | 2.4e+01 | 164 |
| fr | 2002_03 | 1jjg:A | 2.1 | 2.6 | -1.946844e+01 | -4.279224e+00 | 3.9e+00 | 1.3e+01 | 2.9e+01 | 1.1 | 1.6e+01 | 1.9e+01 | 102 |
| fr | 2002_03 | 1k11:A | 10.0 | 4.1 | -6.359444e+00 | 1.766834e+01 | 3.2e+00 | 4.8e+00 | 7.7e+01 | 0.70 | 5.8e+01 | 6.2e+01 | 125 |
| fr | 2002_03 | 1k24:A | 0.6 | 2.0 | -9.396923e+00 | -1.885741e+00 | 1.2e+00 | 2.4e+00 | 2.6e+01 | 4.0 | 7.6e+00 | 1.0e+01 | 249 |
| fr | 2002_03 | 1k8h:A | 1.5 | 2.3 | -1.867795e+01 | -1.820602e+00 | 8.3e+00 | 1.4e+01 | 2.4e+01 | 9.0 | 1.6e+01 | 1.6e+01 | 133 |
| fr | 2002_03 | 1kil:E | 1.5 | 1.6 | -1.908750e+01 | -1.485194e+01 | 9.8e+00 | 2.0e+01 | 7.8e+01 | 29 | 2.7e+01 | 3.2e+01 | 41 |
| fr | 2002_03 | 1kj6:A | 4.7 | 3.7 | 3.060121e+01 | 2.244091e+01 | 6.9e+01 | 7.3e+01 | 7.3e+01 | 14 | 6.9e+01 | 7.3e+01 | 45 |
| fr | 2002_03 | 1kjk:A | 0.6 | 0 | -4.362857e+01 | -1.246531e+01 | 8.2e+00 | 1.8e+01 | 2.9e+01 | 38 | 0.0e+00 | 0.0e+00 | 49 |
| fr | 2002_03 | 1kqg:C | 0.2 | 0.7 | -1.908750e+01 | -2.458535e+00 | 9.3e-01 | 2.3e+00 | 1.5e+01 | 1.8 | 5.1e+00 | 6.9e+00 | 216 |
| fr | 2002_03 | 1kqr:A | 1.3 | 1.6 | -9.543750e+00 | -1.672061e+00 | 1.2e+00 | 1.2e+00 | 4.0e+01 | 0.24 | 1.0e+01 | 1.4e+01 | 160 |
| fr | 2002_03 | 1ktb:A | 6.4 | 4.1 | 1.144262e+01 | 2.052919e+00 | 1.8e+00 | 6.2e+00 | 5.1e+01 | 6.2 | 2.5e+01 | 2.8e+01 | 388 |
| fr | 2002_03 | 1ku7:A | 6.2 | 3.9 | -1.420465e+01 | 2.161229e+01 | 5.6e+01 | 5.6e+01 | 5.9e+01 | 0.08 | 5.9e+01 | 5.9e+01 | 73 |
| fr | 2002_03 | THIS_month:psum | 3.0 | 2.4 | 21.0 | 13.0 | 16.1 | 20.1 | 50.4 | 9.5 | 27.1 | 29.8 | 137.2 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |