| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2002_03 | THIS_month:psum | 6.2 | 3.5 | 11.4 | 14.2 | 29.8 | 38.9 | 88.5 | 5.1 | 48.5 | 54.2 | 140.1 |
| fr | 2002_03 | 1gk7:A | 4.3 | 3.9 | -1.796471e+01 | 3.586550e+01 | 7.9e+01 | 7.9e+01 | 8.7e+01 | 2.06e+01 | 7.9e+01 | 7.9e+01 | 39 |
| fr | 2002_03 | 1ib8:A | 8.6 | 3.7 | 1.096145e+01 | 5.436145e+00 | 1.5e+01 | 2.9e+01 | 8.2e+01 | 1.75e+00 | 3.0e+01 | 3.5e+01 | 164 |
| fr | 2002_03 | 1k11:A | 15.1 | 3.7 | -5.175919e+00 | 2.899045e+01 | 4.9e+01 | 6.2e+01 | 9.4e+01 | 3.67e-02 | 8.2e+01 | 8.4e+01 | 125 |
| fr | 2002_03 | 1k24:A | 1.5 | 2.8 | -3.290460e+00 | 1.303391e+00 | 1.2e+00 | 2.8e+00 | 7.3e+01 | 5.21e-01 | 1.1e+01 | 1.6e+01 | 249 |
| fr | 2002_03 | 1k8h:A | 1.2 | 2.0 | -5.680523e+00 | -3.739472e+00 | 3.0e+00 | 6.0e+00 | 7.6e+01 | 2.19e+01 | 1.6e+01 | 2.4e+01 | 133 |
| fr | 2002_03 | 1kil:E | 4.3 | 3.9 | -1.489756e+01 | 2.324328e+01 | 5.6e+01 | 7.1e+01 | 1.0e+02 | 8.70e+00 | 7.3e+01 | 7.3e+01 | 41 |
| fr | 2002_03 | 1kj6:A | 5.6 | 3.7 | 2.463025e+01 | 2.244091e+01 | 7.1e+01 | 8.0e+01 | 9.1e+01 | 5.91e+00 | 7.6e+01 | 8.7e+01 | 45 |
| fr | 2002_03 | 1kjk:A | 2.8 | 2.6 | -1.246531e+01 | 8.777357e+00 | 2.9e+01 | 4.1e+01 | 1.0e+02 | 3.91e-02 | 4.1e+01 | 5.1e+01 | 49 |
| fr | 2002_03 | 1kqg:C | 3.7 | 3.9 | 5.855117e+00 | 4.328821e+00 | 2.8e+00 | 6.0e+00 | 8.7e+01 | 9.03e-01 | 3.9e+01 | 4.6e+01 | 216 |
| fr | 2002_03 | 1kqr:A | 3.2 | 3.3 | -4.183538e+00 | 3.223468e+00 | 1.9e+00 | 7.5e+00 | 9.1e+01 | 6.63e-01 | 2.8e+01 | 3.7e+01 | 160 |
| fr | 2002_03 | 1ktb:A | 18.0 | 4.6 | 4.331054e+00 | 6.479078e+00 | 1.3e+01 | 3.0e+01 | 9.3e+01 | 3.19e-03 | 4.5e+01 | 5.3e+01 | 388 |
| fr | 2002_03 | 1ku7:A | 6.6 | 4.1 | -9.396923e+00 | 1.693524e+01 | 3.7e+01 | 5.3e+01 | 8.9e+01 | 8.58e-01 | 6.3e+01 | 6.6e+01 | 73 |
| fr | 2002_03 | THIS_month:psum | 6.2 | 3.5 | 11.4 | 14.2 | 29.8 | 38.9 | 88.5 | 5.1 | 48.5 | 54.2 | 140.1 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |