| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2002_03 | THIS_month:psum | 4.5 | 2.7 | 8.9 | 10.4 | 19.0 | 25.8 | 84.4 | 5.1 | 44.2 | 49.0 | 140.1 |
| fr | 2002_03 | 1gk7:A | 1.9 | 3.7 | -1.796471e+01 | 5.283375e-01 | 4.1e+01 | 4.6e+01 | 8.7e+01 | 2.06e+01 | 7.2e+01 | 7.2e+01 | 39 |
| fr | 2002_03 | 1ib8:A | 0.7 | 3.3 | -3.925868e+00 | -1.064218e+00 | 6.1e-01 | 3.0e+00 | 8.2e+01 | 1.75e+00 | 1.9e+01 | 2.2e+01 | 164 |
| fr | 2002_03 | 1k11:A | 15.1 | 3.3 | -5.453571e+00 | 2.899045e+01 | 4.9e+01 | 6.2e+01 | 9.0e+01 | 3.67e-02 | 8.2e+01 | 8.4e+01 | 125 |
| fr | 2002_03 | 1k24:A | 1.5 | 2.8 | -3.567006e+00 | 1.229150e+00 | 4.0e-01 | 2.8e+00 | 5.6e+01 | 5.21e-01 | 1.1e+01 | 1.4e+01 | 249 |
| fr | 2002_03 | 1k8h:A | 1.1 | 0.7 | -6.034236e+00 | -4.073923e+00 | 2.3e+00 | 4.5e+00 | 7.5e+01 | 2.19e+01 | 1.4e+01 | 1.7e+01 | 133 |
| fr | 2002_03 | 1kil:E | 2.4 | 3.5 | -1.489756e+01 | 2.262579e+01 | 0.0e+00 | 0.0e+00 | 1.0e+02 | 8.70e+00 | 7.1e+01 | 7.1e+01 | 41 |
| fr | 2002_03 | 1kj6:A | 4.9 | 3.7 | 2.463025e+01 | 2.244091e+01 | 7.1e+01 | 7.8e+01 | 9.1e+01 | 5.91e+00 | 7.6e+01 | 8.7e+01 | 45 |
| fr | 2002_03 | 1kjk:A | 1.2 | 1.6 | -1.272500e+01 | 8.777357e+00 | 1.8e+01 | 3.7e+01 | 9.8e+01 | 3.91e-02 | 3.1e+01 | 3.7e+01 | 49 |
| fr | 2002_03 | 1kqg:C | 3.7 | 3.9 | 3.252784e-01 | 1.555373e+00 | 2.8e+00 | 3.2e+00 | 8.7e+01 | 9.03e-01 | 3.9e+01 | 4.6e+01 | 216 |
| fr | 2002_03 | 1kqr:A | 3.2 | 1.2 | -4.592477e+00 | 1.856160e-01 | 1.2e+00 | 4.4e+00 | 8.3e+01 | 6.63e-01 | 2.1e+01 | 3.2e+01 | 160 |
| fr | 2002_03 | 1ktb:A | 13.8 | 1.6 | 1.948699e+00 | 4.036118e+00 | 4.9e+00 | 1.6e+01 | 8.6e+01 | 3.19e-03 | 3.5e+01 | 4.7e+01 | 388 |
| fr | 2002_03 | 1ku7:A | 5.5 | 3.9 | -1.071579e+01 | 1.416087e+01 | 3.7e+01 | 5.3e+01 | 7.8e+01 | 8.58e-01 | 6.0e+01 | 6.0e+01 | 73 |
| fr | 2002_03 | THIS_month:psum | 4.5 | 2.7 | 8.9 | 10.4 | 19.0 | 25.8 | 84.4 | 5.1 | 44.2 | 49.0 | 140.1 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |