| METHOD about: | ../../../doc/explain_methods.html#PX_about_superfamily |
| METHOD url: | Superfamily |
| TYPE : | fr |
| NPROT : | 297 |
| NWEEKS : | 130 |
| NOTE 1 : | here ALL results obtained for Superfamily in month 2002_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.3 | 2.6 | 1.9 | 3.1 | 15.1 | 20.9 | 82.4 | 2.0 | 29.8 | 33.8 | 151.8 |
| fr | 2002_02 | THIS_month:psum | 4.3 | 2.9 | 20.5 | 12.7 | 22.7 | 30.7 | 88.1 | 1.9 | 37.0 | 42.0 | 159.5 |
| fr | 2002_02 | 1g9p:A | 1.9 | 2.0 | -1.388182e+01 | -1.337406e+01 | 2.0e+01 | 2.9e+01 | 9.8e+01 | 1.50E+01 | 3.1e+01 | 4.0e+01 | 45 |
| fr | 2002_02 | 1i1g:A | 6.8 | 4.4 | -3.628228e+00 | 1.105569e+01 | 1.7e+01 | 3.2e+01 | 9.5e+01 | 1.20E-13 | 3.1e+01 | 3.4e+01 | 140 |
| fr | 2002_02 | 1i2u:A | 4.1 | 3.1 | 1.763158e+01 | 1.469768e+01 | 5.7e+01 | 6.8e+01 | 9.1e+01 | 1.00E-04 | 5.9e+01 | 6.6e+01 | 44 |
| fr | 2002_02 | 1igq:A | 4.7 | 3.3 | -1.357333e+01 | 1.333843e+01 | 3.9e+01 | 5.6e+01 | 8.3e+01 | 2.20E-01 | 5.4e+01 | 5.9e+01 | 54 |
| fr | 2002_02 | 1itp:A | 9.7 | 4.1 | 2.056850e+01 | 1.761816e+01 | 6.8e+01 | 7.8e+01 | 9.0e+01 | 1.40E-09 | 7.4e+01 | 8.1e+01 | 77 |
| fr | 2002_02 | 1jdm:A | 2.3 | 2.3 | -2.381636e+01 | -1.598655e+01 | 3.5e+01 | 5.5e+01 | 8.1e+01 | 6.50E+00 | 6.5e+01 | 6.8e+01 | 31 |
| fr | 2002_02 | 1jkz:A | 6.9 | 4.2 | 3.968758e+01 | 2.930718e+01 | 9.8e+01 | 9.8e+01 | 1.0e+02 | 2.80E-11 | 9.8e+01 | 9.8e+01 | 46 |
| fr | 2002_02 | 1jmu:A | 1.1 | 2.0 | -2.443200e+01 | -1.843808e+01 | 3.0e+01 | 4.5e+01 | 7.6e+01 | 8.10E+00 | 4.8e+01 | 5.5e+01 | 33 |
| fr | 2002_02 | 1jmu:B | 1.8 | 2.8 | -1.357558e+00 | -8.121802e-01 | 3.3e-01 | 1.2e+00 | 7.3e+01 | 8.50E-01 | 3.9e+00 | 5.9e+00 | 608 |
| fr | 2002_02 | 1jr5:A | 2.3 | 2.8 | -8.136276e+00 | -3.658503e+00 | 4.4e+00 | 1.8e+01 | 7.8e+01 | 1.10E+00 | 2.9e+01 | 3.9e+01 | 90 |
| fr | 2002_02 | 1jrm:A | 1.1 | 1.6 | -5.477263e+00 | -4.791377e+00 | 2.9e+00 | 9.6e+00 | 9.3e+01 | 5.20E-04 | 1.5e+01 | 2.0e+01 | 104 |
| fr | 2002_02 | 1jsb:A | 7.3 | 4.1 | -8.702660e+00 | 1.270872e+01 | 5.3e+01 | 6.3e+01 | 1.0e+02 | 3.90E-03 | 6.0e+01 | 6.7e+01 | 70 |
| fr | 2002_02 | 1jw2:A | 3.3 | 2.6 | 4.148504e+00 | -3.645545e+00 | 4.2e+00 | 9.7e+00 | 7.8e+01 | 3.40E+00 | 2.6e+01 | 3.2e+01 | 72 |
| fr | 2002_02 | 1jw3:A | 1.4 | 2.6 | -4.577818e+00 | 6.618176e-01 | 2.9e+00 | 3.6e+00 | 8.6e+01 | 2.50E-01 | 1.0e+01 | 1.4e+01 | 140 |
| fr | 2002_02 | 1jy1:A | 0.6 | 2.3 | -1.778410e+00 | -1.001783e+00 | 0.0e+00 | 2.3e-01 | 7.9e+01 | 5.20E-01 | 6.0e+00 | 7.9e+00 | 431 |
| fr | 2002_02 | 1jyg:A | 2.3 | 2.8 | -7.659601e+00 | -1.201109e+00 | 1.3e+01 | 1.7e+01 | 9.0e+01 | 2.80E+00 | 2.8e+01 | 3.2e+01 | 69 |
| fr | 2002_02 | 1k1f:E | 2.0 | 1.6 | -1.035254e+01 | -6.768184e-01 | 6.3e+00 | 1.9e+01 | 9.4e+01 | 3.50E+00 | 3.3e+01 | 4.1e+01 | 63 |
| fr | 2002_02 | 1k28:D | 0.5 | 2.3 | -2.287640e+00 | -1.683475e+00 | 0.0e+00 | 2.9e-01 | 7.7e+01 | 3.30E+00 | 8.3e+00 | 9.7e+00 | 349 |
| fr | 2002_02 | 1k5h:B | 1.5 | 2.6 | -8.025654e-01 | -1.087393e-01 | 0.0e+00 | 5.1e-01 | 8.3e+01 | 6.00E-03 | 8.7e+00 | 1.0e+01 | 391 |
| fr | 2002_02 | 1kbh:A | 2.3 | 2.0 | -1.526668e+01 | -1.299574e+01 | 1.9e+01 | 2.8e+01 | 8.5e+01 | 1.50E+00 | 3.2e+01 | 4.3e+01 | 47 |
| fr | 2002_02 | 1khc:A | 2.8 | 2.8 | -4.771875e+00 | -7.206253e-01 | 7.4e-01 | 3.0e+00 | 9.5e+01 | 4.00E+00 | 2.0e+01 | 2.8e+01 | 135 |
| fr | 2002_02 | 1khg:A | 27.9 | 5.9 | -1.070349e+00 | 1.026328e+01 | 1.3e+01 | 2.8e+01 | 9.1e+01 | 1.90E-154 | 5.0e+01 | 5.6e+01 | 603 |
| fr | 2002_02 | 1kps:B | 2.7 | 2.3 | -4.212414e+00 | -1.610029e+00 | 6.4e-01 | 3.2e+00 | 9.3e+01 | 4.70E-01 | 1.5e+01 | 1.9e+01 | 156 |
| fr | 2002_02 | 1kq4:D | 3.4 | 2.8 | -2.743364e+00 | 4.982102e-01 | 6.3e+00 | 9.2e+00 | 9.3e+01 | 4.00E-01 | 1.3e+01 | 1.9e+01 | 206 |
| fr | 2002_02 | 1kqh:A | 5.0 | 3.3 | 2.069927e+01 | 1.837740e+01 | 7.9e+01 | 8.9e+01 | 9.7e+01 | 5.70E-03 | 8.7e+01 | 8.9e+01 | 38 |
| fr | 2002_02 | 1ktz:B | 6.9 | 3.3 | -6.107995e+00 | 1.142109e+01 | 2.2e+01 | 3.6e+01 | 9.4e+01 | 2.70E-27 | 5.8e+01 | 6.1e+01 | 106 |
| fr | 2002_02 | THIS_month:psum | 4.3 | 2.9 | 20.5 | 12.7 | 22.7 | 30.7 | 88.1 | 1.9 | 37.0 | 42.0 | 159.5 |
| fr | 2004_03_05 | psum | 3.3 | 2.6 | 1.9 | 3.1 | 15.1 | 20.9 | 82.4 | 2.0 | 29.8 | 33.8 | 151.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |