| METHOD about: | ../../../doc/explain_methods.html#PX_about_superfamily |
| METHOD url: | Superfamily |
| TYPE : | fr |
| NPROT : | 297 |
| NWEEKS : | 130 |
| NOTE 1 : | here ALL results obtained for Superfamily in month 2002_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.7 | 1.9 | 1.1 | 2.2 | 12.5 | 17.7 | 45.6 | 2.0 | 23.5 | 27.3 | 151.8 |
| fr | 2002_02 | THIS_month:psum | 3.8 | 2.3 | 18.3 | 13.2 | 20.3 | 27.5 | 53.2 | 1.9 | 31.2 | 35.2 | 159.5 |
| fr | 2002_02 | 1g9p:A | 1.9 | 2.0 | -2.247678e+01 | -1.337406e+01 | 2.0e+01 | 2.9e+01 | 6.0e+01 | 1.50E+01 | 3.1e+01 | 4.0e+01 | 45 |
| fr | 2002_02 | 1i1g:A | 6.8 | 4.4 | -8.319903e+00 | 1.105569e+01 | 1.7e+01 | 3.2e+01 | 4.1e+01 | 1.20E-13 | 3.1e+01 | 3.4e+01 | 140 |
| fr | 2002_02 | 1i2u:A | 2.6 | 2.0 | 1.763158e+01 | 1.469768e+01 | 5.5e+01 | 6.1e+01 | 8.0e+01 | 1.00E-04 | 5.5e+01 | 6.4e+01 | 44 |
| fr | 2002_02 | 1igq:A | 4.5 | 3.1 | -1.357333e+01 | 7.605638e+00 | 3.7e+01 | 5.2e+01 | 8.3e+01 | 2.20E-01 | 5.4e+01 | 5.9e+01 | 54 |
| fr | 2002_02 | 1itp:A | 9.7 | 3.9 | 1.595487e+01 | 1.455795e+01 | 6.1e+01 | 7.5e+01 | 9.0e+01 | 1.40E-09 | 7.4e+01 | 8.1e+01 | 77 |
| fr | 2002_02 | 1jdm:A | -0.0 | 0 | -5.552727e+01 | -1.970323e+01 | 6.5e+00 | 1.3e+01 | 3.5e+01 | 6.50E+00 | 0.0e+00 | 0.0e+00 | 31 |
| fr | 2002_02 | 1jkz:A | 6.9 | 3.9 | 1.921991e+01 | 1.921991e+01 | 8.9e+01 | 9.8e+01 | 1.0e+02 | 2.80E-11 | 8.7e+01 | 9.8e+01 | 46 |
| fr | 2002_02 | 1jmu:A | 0.3 | 1.6 | -2.545000e+01 | -1.850909e+01 | 2.1e+01 | 3.6e+01 | 7.3e+01 | 8.10E+00 | 4.8e+01 | 5.5e+01 | 33 |
| fr | 2002_02 | 1jmu:B | 1.8 | 2.8 | -3.214737e+01 | -1.004605e+00 | 3.3e-01 | 1.2e+00 | 3.1e+00 | 8.50E-01 | 2.8e+00 | 2.8e+00 | 608 |
| fr | 2002_02 | 1jr5:A | 0.0 | 0 | -1.796471e+01 | -6.786667e+00 | 0.0e+00 | 3.3e+00 | 3.8e+01 | 1.10E+00 | 0.0e+00 | 0.0e+00 | 90 |
| fr | 2002_02 | 1jrm:A | 1.1 | 1.6 | -1.518039e+01 | -5.186003e+00 | 2.9e+00 | 9.6e+00 | 3.8e+01 | 5.20E-04 | 1.5e+01 | 2.0e+01 | 104 |
| fr | 2002_02 | 1jsb:A | 7.3 | 4.1 | -1.171512e+01 | 1.270872e+01 | 5.3e+01 | 6.3e+01 | 7.4e+01 | 3.90E-03 | 6.0e+01 | 6.7e+01 | 70 |
| fr | 2002_02 | 1jw2:A | 1.3 | 2.6 | -1.363181e+01 | -6.904963e+00 | 4.2e+00 | 6.9e+00 | 6.1e+01 | 3.40E+00 | 2.5e+01 | 2.8e+01 | 72 |
| fr | 2002_02 | 1jw3:A | 1.3 | 1.2 | -9.558758e+00 | -3.546646e+00 | 2.9e+00 | 3.6e+00 | 4.5e+01 | 2.50E-01 | 7.1e+00 | 1.4e+01 | 140 |
| fr | 2002_02 | 1jy1:A | 0.5 | 1.6 | -1.299574e+01 | -1.399171e+00 | 0.0e+00 | 2.3e-01 | 1.1e+01 | 5.20E-01 | 3.9e+00 | 5.8e+00 | 431 |
| fr | 2002_02 | 1jyg:A | 2.3 | 2.8 | -2.410767e+01 | -8.835277e+00 | 1.3e+01 | 1.7e+01 | 3.6e+01 | 2.80E+00 | 1.6e+01 | 2.8e+01 | 69 |
| fr | 2002_02 | 1k1f:E | 0.6 | 0.7 | -1.473604e+01 | -9.690783e+00 | 6.3e+00 | 1.9e+01 | 6.5e+01 | 3.50E+00 | 3.0e+01 | 3.0e+01 | 63 |
| fr | 2002_02 | 1k28:D | 0.5 | 1.2 | -1.221600e+01 | -1.748712e+00 | 0.0e+00 | 2.9e-01 | 1.4e+01 | 3.30E+00 | 6.0e+00 | 7.2e+00 | 349 |
| fr | 2002_02 | 1k5h:B | 0.7 | 2.3 | -3.178578e+00 | -1.256420e+00 | 0.0e+00 | 5.1e-01 | 1.2e+01 | 6.00E-03 | 8.7e+00 | 8.7e+00 | 391 |
| fr | 2002_02 | 1kbh:A | 2.3 | 2.0 | -2.150453e+01 | -1.299574e+01 | 1.9e+01 | 2.8e+01 | 5.3e+01 | 1.50E+00 | 3.2e+01 | 3.2e+01 | 47 |
| fr | 2002_02 | 1khc:A | 0.5 | 0.0 | -1.696667e+01 | -3.904255e+00 | 7.4e-01 | 3.0e+00 | 2.7e+01 | 4.00E+00 | 6.7e+00 | 8.1e+00 | 135 |
| fr | 2002_02 | 1khg:A | 27.9 | 5.5 | -1.430613e+00 | 1.026328e+01 | 1.3e+01 | 2.8e+01 | 6.8e+01 | 1.90E-154 | 5.0e+01 | 5.5e+01 | 603 |
| fr | 2002_02 | 1kps:B | 2.7 | 2.0 | -4.965854e+00 | -1.610029e+00 | 6.4e-01 | 3.2e+00 | 7.9e+01 | 4.70E-01 | 1.5e+01 | 1.9e+01 | 156 |
| fr | 2002_02 | 1kq4:D | 3.4 | 2.8 | -1.566154e+01 | -2.040760e+00 | 6.3e+00 | 9.2e+00 | 1.9e+01 | 4.00E-01 | 1.1e+01 | 1.1e+01 | 206 |
| fr | 2002_02 | 1kqh:A | 5.0 | 3.1 | 2.069927e+01 | 1.750909e+01 | 7.9e+01 | 8.9e+01 | 9.2e+01 | 5.70E-03 | 8.4e+01 | 8.7e+01 | 38 |
| fr | 2002_02 | 1ktz:B | 6.9 | 3.3 | -6.555751e+00 | 1.142109e+01 | 2.2e+01 | 3.6e+01 | 8.7e+01 | 2.70E-27 | 5.8e+01 | 6.1e+01 | 106 |
| fr | 2002_02 | THIS_month:psum | 3.8 | 2.3 | 18.3 | 13.2 | 20.3 | 27.5 | 53.2 | 1.9 | 31.2 | 35.2 | 159.5 |
| fr | 2004_03_05 | psum | 2.7 | 1.9 | 1.1 | 2.2 | 12.5 | 17.7 | 45.6 | 2.0 | 23.5 | 27.3 | 151.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |