| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2002_02 | THIS_month:psum | 4.9 | 2.6 | 17.0 | 9.9 | 21.9 | 31.3 | 82.8 | 5.9 | 41.0 | 48.0 | 140.8 |
| fr | 2002_02 | 1g9p:A | 0.1 | 1.6 | -1.908279e+01 | -1.357153e+01 | 1.6e+01 | 2.7e+01 | 7.1e+01 | 1.82e+01 | 1.8e+01 | 2.7e+01 | 45 |
| fr | 2002_02 | 1i1g:A | 6.0 | 2.3 | -3.663125e+00 | -4.154432e-01 | 7.1e+00 | 2.3e+01 | 8.5e+01 | 2.78e-01 | 1.8e+01 | 2.4e+01 | 140 |
| fr | 2002_02 | 1i2u:A | 2.9 | 2.8 | 1.895235e+01 | -1.630077e+00 | 2.3e+01 | 3.6e+01 | 8.6e+01 | 2.14e+00 | 4.3e+01 | 5.9e+01 | 44 |
| fr | 2002_02 | 1igq:A | 2.0 | 1.6 | -1.327826e+01 | -6.678321e+00 | 3.7e+00 | 1.1e+01 | 8.5e+01 | 1.41e+01 | 2.0e+01 | 4.6e+01 | 54 |
| fr | 2002_02 | 1itp:A | 9.6 | 4.1 | 2.014189e+01 | 5.124866e+00 | 5.5e+01 | 7.9e+01 | 9.2e+01 | 1.86e-01 | 7.5e+01 | 8.1e+01 | 77 |
| fr | 2002_02 | 1jdm:A | 2.6 | 2.8 | -1.201283e+01 | -1.162479e+01 | 2.6e+01 | 5.5e+01 | 9.7e+01 | 2.14e+01 | 7.4e+01 | 7.4e+01 | 31 |
| fr | 2002_02 | 1jkz:A | 6.9 | 3.9 | 1.921991e+01 | 1.921991e+01 | 8.9e+01 | 9.8e+01 | 1.0e+02 | 7.44e-01 | 8.7e+01 | 9.8e+01 | 46 |
| fr | 2002_02 | 1jmu:A | 0.1 | 1.6 | -2.443200e+01 | -1.850909e+01 | 0.0e+00 | 0.0e+00 | 7.6e+01 | 1.69e+01 | 3.3e+01 | 3.9e+01 | 33 |
| fr | 2002_02 | 1jmu:B | 1.5 | 2.0 | -1.104020e+00 | -8.544144e-01 | 0.0e+00 | 0.0e+00 | 4.5e+01 | 3.52e-01 | 3.3e+00 | 5.1e+00 | 608 |
| fr | 2002_02 | 1jr5:A | 2.2 | 2.3 | -4.886729e+00 | -1.749582e+00 | 1.1e+00 | 7.8e+00 | 8.7e+01 | 8.50e+00 | 3.6e+01 | 4.0e+01 | 90 |
| fr | 2002_02 | 1jrm:A | 4.8 | 1.2 | -3.532467e+00 | 1.632773e+00 | 2.9e+00 | 3.8e+00 | 7.1e+01 | 2.82e-01 | 1.7e+01 | 2.7e+01 | 104 |
| fr | 2002_02 | 1jsb:A | 8.4 | 3.9 | -9.821498e+00 | 1.697460e+01 | 6.3e+01 | 7.3e+01 | 8.9e+01 | 8.69e-01 | 8.0e+01 | 8.1e+01 | 70 |
| fr | 2002_02 | 1jw2:A | 2.0 | 2.3 | -1.032687e+01 | -7.857855e+00 | 6.9e+00 | 2.5e+01 | 7.9e+01 | 1.16e+01 | 3.6e+01 | 4.2e+01 | 72 |
| fr | 2002_02 | 1jw3:A | 0.9 | 1.6 | -1.349781e+00 | 1.694395e+00 | 0.0e+00 | 0.0e+00 | 7.9e+01 | 1.13e+00 | 1.1e+01 | 2.0e+01 | 140 |
| fr | 2002_02 | 1jyg:A | 1.9 | 1.6 | -8.470073e+00 | -5.686928e+00 | 1.3e+01 | 2.5e+01 | 8.6e+01 | 6.52e+00 | 2.6e+01 | 3.3e+01 | 69 |
| fr | 2002_02 | 1k5h:B | 10.1 | 3.7 | 3.828270e+00 | 3.881724e+00 | 2.3e+00 | 5.4e+00 | 7.8e+01 | 1.06e-01 | 3.0e+01 | 3.6e+01 | 391 |
| fr | 2002_02 | 1kbh:A | 0.9 | 2.8 | -2.022007e+01 | -1.282278e+01 | 6.4e+00 | 1.7e+01 | 6.4e+01 | 1.75e+01 | 3.0e+01 | 3.6e+01 | 47 |
| fr | 2002_02 | 1khc:A | 1.2 | 1.6 | -4.662595e+00 | -2.873249e+00 | 1.5e+00 | 2.2e+00 | 9.7e+01 | 5.05e-01 | 2.3e+01 | 2.7e+01 | 135 |
| fr | 2002_02 | 1khg:A | 31.3 | 4.6 | -1.213751e+00 | 1.052494e+01 | 3.6e+01 | 4.7e+01 | 8.0e+01 | 3.73e-04 | 5.8e+01 | 6.6e+01 | 603 |
| fr | 2002_02 | 1kps:B | 1.1 | 3.5 | -4.127027e+00 | 5.143524e+00 | 3.2e+00 | 7.7e+00 | 9.5e+01 | 6.69e+00 | 3.8e+01 | 4.6e+01 | 156 |
| fr | 2002_02 | 1kqh:A | 5.4 | 3.7 | 2.306755e+01 | 2.246050e+01 | 8.9e+01 | 9.7e+01 | 9.7e+01 | 3.45e+00 | 8.9e+01 | 8.9e+01 | 38 |
| fr | 2002_02 | 1ktz:B | 6.0 | 2.3 | -6.847720e+00 | 1.311297e+01 | 3.7e+01 | 5.0e+01 | 8.4e+01 | 2.60e-03 | 5.8e+01 | 6.2e+01 | 106 |
| fr | 2002_02 | THIS_month:psum | 4.9 | 2.6 | 17.0 | 9.9 | 21.9 | 31.3 | 82.8 | 5.9 | 41.0 | 48.0 | 140.8 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |