| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2002_01 | THIS_month:psum | 2.4 | 2.4 | 18.1 | 2.6 | 11.7 | 17.8 | 39.7 | 8.4 | 21.4 | 24.7 | 252.5 |
| fr | 2002_01 | 1hj0:A | 0.7 | 2.0 | -2.443200e+01 | -1.489728e+01 | 1.2e+01 | 3.2e+01 | 6.1e+01 | 24 | 2.9e+01 | 3.4e+01 | 41 |
| fr | 2002_01 | 1hty:A | 1.3 | 1.2 | -8.249758e+00 | 2.186688e-01 | 1.0e+00 | 1.3e+00 | 7.5e+00 | 1.1 | 2.1e+00 | 3.1e+00 | 988 |
| fr | 2002_01 | 1jke:A | 0.8 | 1.6 | -1.325706e+01 | -2.448554e+00 | 1.4e+00 | 9.7e+00 | 2.8e+01 | 0.03 | 1.4e+01 | 1.9e+01 | 145 |
| fr | 2002_01 | 1jy8:A | 2.8 | 2.3 | 3.509673e+01 | 5.660763e+00 | 1.4e+01 | 1.5e+01 | 2.6e+01 | 5.1 | 1.7e+01 | 2.1e+01 | 155 |
| fr | 2002_01 | 1k05:A | 3.2 | 2.0 | -1.246531e+01 | 2.482511e-01 | 4.4e+00 | 9.6e+00 | 3.6e+01 | 0.67 | 1.8e+01 | 2.0e+01 | 135 |
| fr | 2002_01 | 1kbf:A | 6.4 | 3.7 | -1.420465e+01 | 4.942109e+00 | 6.9e+01 | 8.2e+01 | 8.8e+01 | 2e-06 | 7.3e+01 | 8.0e+01 | 49 |
| fr | 2002_01 | 1knz:A | 2.4 | 3.5 | -1.489236e+01 | -8.253894e-01 | 2.6e+00 | 7.1e+00 | 2.7e+01 | 6.2 | 1.4e+01 | 1.5e+01 | 154 |
| fr | 2002_01 | 1kpk:A | 3.9 | 4.1 | 1.192873e+00 | 2.064580e+00 | 6.7e-01 | 1.3e+00 | 3.8e+01 | 39 | 1.2e+01 | 1.4e+01 | 450 |
| fr | 2002_01 | 1kq5:A | 0.9 | 1.6 | -8.483333e+00 | -3.452555e+00 | 6.4e-01 | 2.6e+00 | 4.6e+01 | 0.31 | 1.4e+01 | 1.7e+01 | 156 |
| fr | 2002_01 | THIS_month:psum | 2.4 | 2.4 | 18.1 | 2.6 | 11.7 | 17.8 | 39.7 | 8.4 | 21.4 | 24.7 | 252.5 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |