| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2002_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2002_01 | THIS_month:psum | 1.9 | 1.9 | 1.2 | 9.3 | 14.8 | 36.2 | 8.4 | 17.9 | 22.2 | 252.5 | |
| fr | 2002_01 | 1hj0:A | 0.5 | 2.0 | -2.443200e+01 | -1.489728e+01 | 9.8e+00 | 2.0e+01 | 6.1e+01 | 24 | 2.7e+01 | 3.2e+01 | 41 |
| fr | 2002_01 | 1hty:A | 0.5 | 0 | -1.221599e+01 | -5.067047e-01 | 7.1e-01 | 1.1e+00 | 5.1e+00 | 1.1 | 0.0e+00 | 0.0e+00 | 988 |
| fr | 2002_01 | 1jke:A | 0.8 | 1.6 | -1.330248e+01 | -3.374066e+00 | 1.4e+00 | 9.0e+00 | 2.8e+01 | 0.03 | 1.3e+01 | 1.9e+01 | 145 |
| fr | 2002_01 | 1jy8:A | 1.8 | 2.3 | -1.416071e+01 | -3.192085e+00 | 1.3e+00 | 7.1e+00 | 2.5e+01 | 5.1 | 1.3e+01 | 1.5e+01 | 155 |
| fr | 2002_01 | 1k05:A | 3.2 | 2.0 | -1.246531e+01 | 2.482511e-01 | 4.4e+00 | 9.6e+00 | 3.6e+01 | 0.67 | 1.6e+01 | 1.9e+01 | 135 |
| fr | 2002_01 | 1kbf:A | 6.4 | 3.5 | -1.420465e+01 | 2.321586e+00 | 6.5e+01 | 8.2e+01 | 8.8e+01 | 2e-06 | 6.5e+01 | 7.8e+01 | 49 |
| fr | 2002_01 | 1knz:A | 2.4 | 3.5 | -1.489298e+01 | -8.503082e-01 | 6.5e-01 | 1.9e+00 | 2.7e+01 | 6.2 | 1.4e+01 | 1.5e+01 | 154 |
| fr | 2002_01 | 1kpk:A | 1.1 | 0.7 | -1.388029e+01 | -1.129863e+00 | 4.4e-01 | 1.3e+00 | 9.8e+00 | 39 | 4.7e+00 | 5.3e+00 | 450 |
| fr | 2002_01 | 1kq5:A | 0.8 | 1.6 | -8.483333e+00 | -3.452555e+00 | 0.0e+00 | 1.9e+00 | 4.6e+01 | 0.31 | 9.0e+00 | 1.7e+01 | 156 |
| fr | 2002_01 | THIS_month:psum | 1.9 | 1.9 | 1.2 | 9.3 | 14.8 | 36.2 | 8.4 | 17.9 | 22.2 | 252.5 | |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |