| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2002_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2002_01 | THIS_month:psum | 4.5 | 3.1 | 7.4 | 4.4 | 17.0 | 25.1 | 92.1 | 6.0 | 37.2 | 41.2 | 160.6 |
| fr | 2002_01 | 1hj0:A | 4.0 | 3.7 | 1.654279e+01 | 5.808780e+00 | 4.6e+01 | 6.3e+01 | 9.8e+01 | 3.28e+01 | 7.1e+01 | 7.1e+01 | 41 |
| fr | 2002_01 | 1jke:A | 4.0 | 2.3 | 1.044351e+01 | 5.689395e+00 | 7.6e+00 | 2.0e+01 | 8.7e+01 | 1.88e+00 | 2.8e+01 | 3.0e+01 | 145 |
| fr | 2002_01 | 1jy8:A | 3.1 | 3.1 | 5.661904e-01 | 9.132980e-01 | 3.2e+00 | 8.4e+00 | 9.8e+01 | 1.31e+00 | 1.9e+01 | 2.5e+01 | 155 |
| fr | 2002_01 | 1k05:A | 8.8 | 4.1 | -4.592481e+00 | 1.026601e+01 | 1.4e+01 | 2.1e+01 | 9.9e+01 | 4.62e+00 | 5.3e+01 | 6.1e+01 | 135 |
| fr | 2002_01 | 1kbf:A | 6.5 | 3.1 | -1.246531e+01 | 5.017019e+00 | 6.3e+01 | 8.2e+01 | 1.0e+02 | 1.96e-03 | 7.1e+01 | 8.0e+01 | 49 |
| fr | 2002_01 | 1knz:A | 2.9 | 2.8 | 8.097072e+00 | 1.624692e+00 | 0.0e+00 | 6.5e-01 | 8.2e+01 | 2.88e+00 | 2.3e+01 | 2.5e+01 | 154 |
| fr | 2002_01 | 1kpk:A | 4.1 | 3.7 | 1.395712e+00 | 1.791228e+00 | 1.8e+00 | 2.9e+00 | 9.5e+01 | 1.46e-01 | 1.3e+01 | 1.4e+01 | 450 |
| fr | 2002_01 | 1kq5:A | 2.8 | 2.3 | -5.006557e+00 | -1.395697e+00 | 6.4e-01 | 3.2e+00 | 7.8e+01 | 4.52e+00 | 2.0e+01 | 2.4e+01 | 156 |
| fr | 2002_01 | THIS_month:psum | 4.5 | 3.1 | 7.4 | 4.4 | 17.0 | 25.1 | 92.1 | 6.0 | 37.2 | 41.2 | 160.6 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |