| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2001_12 | THIS_month:psum | 3.2 | 2.2 | 5.3 | 4.7 | 8.8 | 13.2 | 48.9 | 5.2 | 21.9 | 25.4 | 145.4 |
| fr | 2001_12 | 1go3:F | 2.8 | 1.6 | -1.434987e+01 | 3.518141e-01 | 2.8e+00 | 6.5e+00 | 3.9e+01 | 0.01 | 2.5e+01 | 3.2e+01 | 107 |
| fr | 2001_12 | 1h6w:A | 1.4 | 2.0 | -1.001311e+01 | -3.839545e+00 | 1.3e+00 | 3.3e+00 | 4.0e+01 | 2.2 | 1.1e+01 | 1.5e+01 | 151 |
| fr | 2001_12 | 1hn3:A | 1.2 | 1.2 | -1.696667e+01 | -1.509785e+01 | 1.0e+01 | 2.2e+01 | 9.0e+01 | 22 | 3.0e+01 | 3.8e+01 | 40 |
| fr | 2001_12 | 1hqz:4 | 17.5 | 5.7 | 1.736171e+00 | 2.121624e+01 | 8.2e+01 | 8.7e+01 | 9.0e+01 | 1e-32 | 8.3e+01 | 8.7e+01 | 137 |
| fr | 2001_12 | 1i35:A | 1.0 | 1.6 | -1.566154e+01 | -6.426320e+00 | 0.0e+00 | 4.2e+00 | 4.1e+01 | 0.73 | 1.5e+01 | 1.7e+01 | 95 |
| fr | 2001_12 | 1i3b:A | 1.3 | 0.7 | -8.483333e+00 | -2.557953e+00 | 8.5e-01 | 4.2e+00 | 6.1e+01 | 8.3 | 1.7e+01 | 2.1e+01 | 118 |
| fr | 2001_12 | 1irq:B | 3.0 | 2.6 | -1.696658e+01 | -1.224897e+01 | 2.0e+01 | 3.1e+01 | 7.3e+01 | 24 | 3.9e+01 | 3.5e+01 | 49 |
| fr | 2001_12 | 1j83:A | 2.9 | 2.3 | -1.131111e+01 | 2.479152e+00 | 5.6e-01 | 1.1e+00 | 3.0e+01 | 1.1 | 9.6e+00 | 1.2e+01 | 178 |
| fr | 2001_12 | 1jbj:A | 7.9 | 3.3 | 5.322990e+00 | 4.996291e+00 | 3.2e+00 | 1.1e+01 | 8.3e+01 | 1e-27 | 2.7e+01 | 3.4e+01 | 186 |
| fr | 2001_12 | 1ji8:A | 1.7 | 1.6 | -9.495844e+00 | -3.170302e+00 | 9.9e+00 | 1.5e+01 | 5.8e+01 | 1.1 | 1.6e+01 | 2.0e+01 | 111 |
| fr | 2001_12 | 1jju:C | 1.0 | 1.6 | -1.357330e+01 | -5.733884e+00 | 7.7e+00 | 1.4e+01 | 5.8e+01 | 6.3 | 2.6e+01 | 2.9e+01 | 78 |
| fr | 2001_12 | 1jra:A | 3.8 | 2.6 | -1.171601e+01 | 3.137935e+00 | 9.4e-01 | 7.5e+00 | 3.9e+01 | 4.4 | 2.3e+01 | 2.4e+01 | 106 |
| fr | 2001_12 | 1k2f:A | 1.3 | 0.7 | -8.852174e+00 | -1.248553e+00 | 2.1e+00 | 4.2e+00 | 3.6e+01 | 2.9 | 1.4e+01 | 1.9e+01 | 190 |
| fr | 2001_12 | 1k8k:D | 1.6 | 2.3 | -7.048347e+00 | 2.209640e-01 | 1.8e+00 | 2.5e+00 | 2.5e+01 | 0.16 | 1.1e+01 | 1.4e+01 | 284 |
| fr | 2001_12 | 1k8k:E | 2.7 | 2.8 | 8.875685e+00 | 4.923391e+00 | 4.6e+00 | 8.0e+00 | 4.8e+01 | 5.1 | 1.7e+01 | 2.3e+01 | 174 |
| fr | 2001_12 | 1k8k:F | 2.4 | 2.8 | -9.681225e+00 | 2.824015e+00 | 6.0e+00 | 8.4e+00 | 3.8e+01 | 13 | 1.7e+01 | 2.2e+01 | 167 |
| fr | 2001_12 | 1k8k:G | 2.0 | 2.8 | -1.299549e+01 | -3.692848e+00 | 1.3e+01 | 1.5e+01 | 3.4e+01 | 1.6 | 1.4e+01 | 1.4e+01 | 139 |
| fr | 2001_12 | 1kc6:A | 3.0 | 2.8 | -1.420222e+01 | 2.408706e+00 | 1.2e+00 | 4.8e+00 | 1.7e+01 | 5.4 | 1.2e+01 | 1.4e+01 | 249 |
| fr | 2001_12 | 1kke:B | 2.9 | 2.3 | -1.001311e+01 | -8.752609e-01 | 4.9e-01 | 1.5e+00 | 3.0e+01 | 1.6 | 1.1e+01 | 1.4e+01 | 205 |
| fr | 2001_12 | THIS_month:psum | 3.2 | 2.2 | 5.3 | 4.7 | 8.8 | 13.2 | 48.9 | 5.2 | 21.9 | 25.4 | 145.4 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |