| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_12 | THIS_month:psum | 4.0 | 2.9 | 2.6 | 5.3 | 9.2 | 16.2 | 88.3 | 5.5 | 27.6 | 34 | 147.3 |
| fr | 2001_12 | 1go3:F | 2.6 | 3.9 | 1.169279e+00 | 2.613965e+00 | 1.9e+00 | 9.3e+00 | 9.0e+01 | 4.98e+00 | 2.6e+01 | 3.5e+01 | 107 |
| fr | 2001_12 | 1hn3:A | 2.0 | 2.3 | -1.566153e+01 | -1.349232e+01 | 1.2e+01 | 2.8e+01 | 9.8e+01 | 3.56e+01 | 4.2e+01 | 5.0e+01 | 40 |
| fr | 2001_12 | 1hqz:4 | 17.7 | 5.3 | 1.213555e+00 | 1.989456e+01 | 7.9e+01 | 8.5e+01 | 9.8e+01 | 1.06e-04 | 8.4e+01 | 8.8e+01 | 137 |
| fr | 2001_12 | 1i35:A | 2.3 | 2.0 | -6.035650e+00 | -3.535858e+00 | 8.4e+00 | 2.4e+01 | 8.7e+01 | 4.80e+00 | 2.4e+01 | 3.2e+01 | 95 |
| fr | 2001_12 | 1i3b:A | 1.7 | 2.6 | -5.845479e+00 | -4.415571e+00 | 5.9e+00 | 1.2e+01 | 8.7e+01 | 3.35e-01 | 1.8e+01 | 2.4e+01 | 118 |
| fr | 2001_12 | 1irq:B | 1.9 | 2.3 | -7.224483e+00 | -4.790337e+00 | 8.2e+00 | 2.7e+01 | 9.8e+01 | 2.15e+01 | 3.9e+01 | 4.3e+01 | 49 |
| fr | 2001_12 | 1jbj:A | 7.6 | 3.7 | 4.906503e+00 | 3.829199e+00 | 2.7e+00 | 5.9e+00 | 9.7e+01 | 6.63e-02 | 3.0e+01 | 3.3e+01 | 186 |
| fr | 2001_12 | 1ji8:A | 4.9 | 2.6 | 2.020371e+00 | -1.677983e+00 | 5.4e+00 | 1.6e+01 | 8.5e+01 | 4.51e+00 | 2.5e+01 | 3.2e+01 | 111 |
| fr | 2001_12 | 1jra:A | 4.5 | 3.3 | 1.363188e+00 | 6.875017e+00 | 1.3e+01 | 2.7e+01 | 9.2e+01 | 5.45e+00 | 2.6e+01 | 4.0e+01 | 106 |
| fr | 2001_12 | 1k2f:A | 2.4 | 3.1 | -4.155090e+00 | -3.261169e-01 | 3.2e+00 | 5.8e+00 | 7.7e+01 | 7.80e-01 | 2.3e+01 | 2.8e+01 | 190 |
| fr | 2001_12 | 1k8k:D | 2.5 | 2.8 | 1.644344e-01 | -9.413361e-02 | 7.0e-01 | 1.8e+00 | 7.2e+01 | 1.90e-01 | 1.3e+01 | 1.7e+01 | 284 |
| fr | 2001_12 | 1k8k:E | 3.2 | 3.5 | 3.082579e+00 | 5.255730e+00 | 1.1e+00 | 4.6e+00 | 8.2e+01 | 1.85e+00 | 2.2e+01 | 2.7e+01 | 174 |
| fr | 2001_12 | 1k8k:F | 3.9 | 3.3 | 5.769544e+00 | 7.590522e+00 | 1.2e+00 | 2.4e+00 | 8.6e+01 | 5.41e-02 | 2.6e+01 | 3.0e+01 | 167 |
| fr | 2001_12 | 1k8k:G | 2.5 | 2.8 | 5.880932e+00 | 3.375832e-02 | 7.2e-01 | 2.9e+00 | 8.6e+01 | 6.22e+00 | 1.4e+01 | 2.1e+01 | 139 |
| fr | 2001_12 | 1kc6:A | 3.2 | 1.6 | 1.129485e+00 | 3.449747e-01 | 3.2e+00 | 5.6e+00 | 9.1e+01 | 1.26e-01 | 1.3e+01 | 2.1e+01 | 249 |
| fr | 2001_12 | 1kke:B | 1.7 | 2.6 | -3.393333e+00 | 1.490375e+00 | 1.5e+00 | 2.4e+00 | 8.8e+01 | 1.71e+00 | 1.8e+01 | 2.3e+01 | 205 |
| fr | 2001_12 | THIS_month:psum | 4.0 | 2.9 | 2.6 | 5.3 | 9.2 | 16.2 | 88.3 | 5.5 | 27.6 | 34 | 147.3 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |