| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_11 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2001_11 | THIS_month:psum | 5.1 | 2.6 | 11.0 | 8.2 | 17.8 | 24.0 | 77.3 | 4.9 | 39.7 | 46.3 | 143.6 |
| fr | 2001_11 | 1gl0:I | 4.5 | 3.7 | -1.908601e+01 | 1.124235e+01 | 9.1e+01 | 9.7e+01 | 1.0e+02 | 3.98e+00 | 8.8e+01 | 9.7e+01 | 32 |
| fr | 2001_11 | 1gmm:A | 5.8 | 4.6 | -4.965783e+00 | 1.763873e+01 | 4.1e+01 | 5.5e+01 | 9.6e+01 | 6.12e-01 | 7.5e+01 | 8.1e+01 | 126 |
| fr | 2001_11 | 1gmv:A | 2.0 | 2.0 | -2.912040e+00 | 2.778494e+00 | 0.0e+00 | 3.6e+00 | 5.7e+01 | 6.36e+00 | 2.0e+01 | 2.5e+01 | 138 |
| fr | 2001_11 | 1gny:A | 7.7 | 2.6 | -4.362857e+00 | 6.970365e+00 | 9.2e+00 | 1.8e+01 | 9.2e+01 | 1.56e+00 | 6.3e+01 | 7.3e+01 | 153 |
| fr | 2001_11 | 1hcx:A | 1.0 | 1.6 | -6.639130e+00 | -3.104358e+00 | 7.9e-01 | 6.3e+00 | 7.2e+01 | 2.99e+00 | 1.7e+01 | 2.4e+01 | 127 |
| fr | 2001_11 | 1hdl:A | 2.4 | 2.0 | -6.959899e+00 | -7.392167e+00 | 1.3e+01 | 3.1e+01 | 8.5e+01 | 8.87e+00 | 3.8e+01 | 4.5e+01 | 55 |
| fr | 2001_11 | 1hz4:A | 11.7 | 5.0 | 6.594550e+00 | 5.047141e+00 | 1.4e+00 | 2.5e+00 | 7.2e+01 | 7.03e-02 | 2.6e+01 | 3.2e+01 | 366 |
| fr | 2001_11 | 1i26:A | 2.5 | 2.0 | 5.951466e+00 | -1.796384e+01 | 6.5e+01 | 7.1e+01 | 7.6e+01 | 3.07e+01 | 6.5e+01 | 7.1e+01 | 34 |
| fr | 2001_11 | 1jfa:A | 12.5 | 2.8 | 4.141043e+00 | 7.067703e+00 | 6.2e+00 | 1.5e+01 | 7.7e+01 | 1.57e-02 | 4.5e+01 | 5.5e+01 | 354 |
| fr | 2001_11 | 1jo6:A | 0.2 | 1.2 | -1.970323e+01 | -1.356554e+01 | 2.2e+00 | 2.2e+00 | 6.9e+01 | 2.09e+01 | 3.6e+01 | 4.0e+01 | 45 |
| fr | 2001_11 | 1jrj:A | 3.9 | 3.3 | 2.243176e+01 | 1.668019e+01 | 6.7e+01 | 7.2e+01 | 7.4e+01 | 6.53e-05 | 6.2e+01 | 6.7e+01 | 39 |
| fr | 2001_11 | 1jwa:B | 4.2 | 2.0 | -3.109878e+00 | 4.273838e+00 | 2.3e+00 | 7.8e+00 | 6.5e+01 | 4.44e-01 | 1.8e+01 | 2.5e+01 | 217 |
| fr | 2001_11 | 1jwy:B | 9.8 | 2.0 | -2.852753e+00 | 5.374413e+00 | 5.3e+00 | 1.6e+01 | 6.7e+01 | 1.22e-01 | 2.3e+01 | 3.0e+01 | 281 |
| fr | 2001_11 | 1jyo:A | 1.8 | 1.6 | -2.742329e+00 | 6.166786e+00 | 2.3e+00 | 6.2e+00 | 6.4e+01 | 4.24e+00 | 1.4e+01 | 2.1e+01 | 130 |
| fr | 2001_11 | 1jyo:E | 1.3 | 2.0 | -7.248084e+00 | -8.456924e-01 | 9.8e-01 | 5.9e+00 | 8.1e+01 | 8.99e+00 | 1.1e+01 | 1.6e+01 | 102 |
| fr | 2001_11 | 1k3e:A | 12.6 | 5.2 | 1.531297e+01 | 8.849426e+00 | 0.0e+00 | 5.0e+00 | 9.1e+01 | 2.97e-02 | 6.1e+01 | 6.5e+01 | 141 |
| fr | 2001_11 | 1k5j:A | 2.1 | 1.2 | -8.481407e+00 | -4.299090e+00 | 1.1e+00 | 5.3e+00 | 7.7e+01 | 5.76e+00 | 2.6e+01 | 3.3e+01 | 94 |
| fr | 2001_11 | 1k99:A | 10.5 | 4.6 | 1.166552e+01 | 9.788291e+00 | 4.8e+01 | 6.0e+01 | 8.5e+01 | 3.58e-04 | 5.9e+01 | 6.6e+01 | 91 |
| fr | 2001_11 | 1kaf:A | 3.6 | 2.8 | -7.540741e+00 | 5.207012e+00 | 0.0e+00 | 0.0e+00 | 7.5e+01 | 3.77e+00 | 3.1e+01 | 3.8e+01 | 108 |
| fr | 2001_11 | 1kcf:A | 2.8 | 1.6 | -3.448117e+00 | -8.789076e-01 | 4.2e-01 | 1.7e+00 | 7.2e+01 | 2.56e-01 | 1.7e+01 | 2.2e+01 | 240 |
| fr | 2001_11 | THIS_month:psum | 5.1 | 2.6 | 11.0 | 8.2 | 17.8 | 24.0 | 77.3 | 4.9 | 39.7 | 46.3 | 143.6 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |