| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2001_10 | THIS_month:psum | 2.3 | 2.5 | 8.6 | 3.5 | 11.7 | 16.1 | 47 | 7.4 | 23.7 | 26.7 | 135.3 |
| fr | 2001_10 | 1e9k:A | 1.8 | 2.0 | -1.970323e+01 | -1.549115e+01 | 2.6e+01 | 3.4e+01 | 8.2e+01 | 5.8 | 3.7e+01 | 4.2e+01 | 38 |
| fr | 2001_10 | 1fcq:A | 2.5 | 2.3 | -7.927915e+00 | 9.296474e-01 | 9.6e-01 | 1.6e+00 | 2.5e+01 | 2.8 | 7.6e+00 | 9.2e+00 | 314 |
| fr | 2001_10 | 1goe:A | 1.8 | 2.8 | -1.764834e+01 | -1.121567e+01 | 2.8e+01 | 3.8e+01 | 8.2e+01 | 18 | 4.1e+01 | 4.6e+01 | 39 |
| fr | 2001_10 | 1h7d:A | 1.4 | 2.3 | -2.181428e+01 | -1.204414e+01 | 2.2e+01 | 3.1e+01 | 5.7e+01 | 9.6 | 3.3e+01 | 3.9e+01 | 49 |
| fr | 2001_10 | 1iio:A | 1.0 | 2.8 | -1.017572e+01 | -1.388392e+00 | 7.1e+00 | 1.3e+01 | 7.0e+01 | 0.14 | 2.9e+01 | 3.3e+01 | 84 |
| fr | 2001_10 | 1imu:A | 2.4 | 2.8 | -1.110759e+01 | 2.407697e+00 | 1.9e+00 | 5.6e+00 | 4.5e+01 | 0.42 | 2.1e+01 | 2.4e+01 | 107 |
| fr | 2001_10 | 1jbi:A | 1.0 | 1.2 | -1.357333e+01 | -5.403561e+00 | 2.0e+00 | 3.0e+00 | 4.5e+01 | 6.1 | 1.4e+01 | 2.0e+01 | 100 |
| fr | 2001_10 | 1jcj:B | 5.5 | 3.9 | -5.003179e-01 | 4.694540e+00 | 1.4e+01 | 1.6e+01 | 3.2e+01 | 0.06 | 1.7e+01 | 1.9e+01 | 251 |
| fr | 2001_10 | 1jg5:A | 2.3 | 2.6 | -9.693204e+00 | -2.711810e+00 | 1.2e+00 | 8.4e+00 | 6.4e+01 | 4.3 | 2.8e+01 | 3.1e+01 | 83 |
| fr | 2001_10 | 1jhj:A | 7.4 | 4.6 | -7.883849e+00 | 9.390026e+00 | 3.0e+01 | 3.0e+01 | 3.0e+01 | 0.68 | 3.0e+01 | 3.0e+01 | 161 |
| fr | 2001_10 | 1jid:A | 2.1 | 2.3 | -1.649239e+01 | 2.451635e+00 | 1.3e+01 | 1.4e+01 | 3.2e+01 | 7.6 | 2.1e+01 | 2.4e+01 | 114 |
| fr | 2001_10 | 1jjs:A | 0.7 | 1.2 | -3.592941e+01 | -1.454286e+01 | 2.4e+01 | 3.3e+01 | 4.0e+01 | 44 | 3.1e+01 | 3.3e+01 | 42 |
| fr | 2001_10 | 1jtg:B | 1.6 | 2.6 | -7.302329e+00 | -3.387701e-01 | 6.1e-01 | 2.4e+00 | 5.0e+01 | 5.5 | 2.4e+01 | 2.8e+01 | 165 |
| fr | 2001_10 | 1k30:A | 2.5 | 3.3 | 8.694349e+00 | 1.298975e+00 | 3.6e+00 | 6.3e+00 | 1.3e+01 | 5.9 | 6.9e+00 | 7.4e+00 | 363 |
| fr | 2001_10 | 1k6z:A | 1.8 | 2.0 | -1.357333e+01 | -1.437820e+00 | 1.7e+00 | 5.8e+00 | 3.8e+01 | 1.4 | 1.5e+01 | 1.6e+01 | 120 |
| fr | 2001_10 | THIS_month:psum | 2.3 | 2.5 | 8.6 | 3.5 | 11.7 | 16.1 | 47 | 7.4 | 23.7 | 26.7 | 135.3 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |