| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2001_10 | THIS_month:psum | 1.8 | 1.6 | 5.2 | 4.1 | 9.0 | 37.3 | 7.4 | 15.9 | 18.5 | 135.3 | |
| fr | 2001_10 | 1e9k:A | 1.7 | 2.0 | -2.776364e+01 | -1.607368e+01 | 7.9e+00 | 2.1e+01 | 5.8e+01 | 5.8 | 3.7e+01 | 4.2e+01 | 38 |
| fr | 2001_10 | 1fcq:A | 2.5 | 2.3 | -1.357316e+01 | -1.747163e+00 | 0.0e+00 | 9.6e-01 | 1.4e+01 | 2.8 | 4.5e+00 | 6.7e+00 | 314 |
| fr | 2001_10 | 1goe:A | 0.1 | 0 | -5.552727e+01 | -1.566154e+01 | 7.7e+00 | 1.3e+01 | 2.8e+01 | 18 | 0.0e+00 | 0.0e+00 | 39 |
| fr | 2001_10 | 1h7d:A | 1.4 | 2.3 | -2.181429e+01 | -1.246531e+01 | 4.1e+00 | 2.0e+01 | 5.7e+01 | 9.6 | 3.1e+01 | 3.9e+01 | 49 |
| fr | 2001_10 | 1iio:A | 0.8 | 1.2 | -1.272497e+01 | -7.148847e+00 | 1.2e+00 | 4.8e+00 | 5.7e+01 | 0.14 | 2.9e+01 | 3.3e+01 | 84 |
| fr | 2001_10 | 1imu:A | 2.0 | 2.6 | -1.315828e+01 | -3.533423e+00 | 9.3e-01 | 1.9e+00 | 4.3e+01 | 0.42 | 2.1e+01 | 2.3e+01 | 107 |
| fr | 2001_10 | 1jbi:A | 1.0 | 0.7 | -1.357333e+01 | -6.064062e+00 | 0.0e+00 | 2.0e+00 | 4.5e+01 | 6.1 | 1.3e+01 | 1.5e+01 | 100 |
| fr | 2001_10 | 1jcj:B | 5.5 | 3.9 | -1.104581e+01 | 3.859293e+00 | 2.8e+00 | 1.4e+01 | 1.9e+01 | 0.06 | 1.6e+01 | 1.8e+01 | 251 |
| fr | 2001_10 | 1jg5:A | 1.0 | 0.0 | -1.566148e+01 | -7.065595e+00 | 0.0e+00 | 0.0e+00 | 4.7e+01 | 4.3 | 8.4e+00 | 1.1e+01 | 83 |
| fr | 2001_10 | 1jhj:A | 7.4 | 4.6 | -7.889835e+00 | 9.303764e+00 | 3.0e+01 | 3.0e+01 | 3.0e+01 | 0.68 | 3.0e+01 | 3.0e+01 | 161 |
| fr | 2001_10 | 1jid:A | 1.7 | 2.3 | -1.745053e+01 | 2.451635e+00 | 2.6e+00 | 9.6e+00 | 3.1e+01 | 7.6 | 1.6e+01 | 2.0e+01 | 114 |
| fr | 2001_10 | 1jjs:A | 0.0 | 0 | -3.592941e+01 | -1.454286e+01 | 4.8e+00 | 1.4e+01 | 4.0e+01 | 44 | 0.0e+00 | 0.0e+00 | 42 |
| fr | 2001_10 | 1jtg:B | 1.6 | 2.6 | -7.302329e+00 | -3.387701e-01 | 0.0e+00 | 2.4e+00 | 5.0e+01 | 5.5 | 2.4e+01 | 2.8e+01 | 165 |
| fr | 2001_10 | 1k30:A | 0.3 | 0 | -3.054000e+01 | -1.682644e+00 | 0.0e+00 | 0.0e+00 | 5.5e+00 | 5.9 | 0.0e+00 | 0.0e+00 | 363 |
| fr | 2001_10 | 1k6z:A | 0.6 | 0.0 | -1.454286e+01 | -1.437820e+00 | 8.3e-01 | 1.7e+00 | 3.5e+01 | 1.4 | 1.0e+01 | 1.2e+01 | 120 |
| fr | 2001_10 | THIS_month:psum | 1.8 | 1.6 | 5.2 | 4.1 | 9.0 | 37.3 | 7.4 | 15.9 | 18.5 | 135.3 | |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |