| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2001_10 | THIS_month:psum | 4.4 | 2.1 | 1.2 | 8.7 | 7.2 | 14.4 | 76.0 | 8.0 | 29.2 | 35 | 143.9 |
| fr | 2001_10 | 1e9k:A | 0.8 | 1.2 | -2.106207e+01 | -1.405258e+01 | 2.6e+00 | 7.9e+00 | 7.6e+01 | 2.01e+01 | 4.7e+01 | 5.0e+01 | 38 |
| fr | 2001_10 | 1fcq:A | 6.9 | 3.7 | -2.342082e+00 | 6.232612e+00 | 6.4e-01 | 1.9e+00 | 7.5e+01 | 1.90e-01 | 3.0e+01 | 4.1e+01 | 314 |
| fr | 2001_10 | 1h7d:A | 2.2 | 2.0 | -1.265157e+01 | -8.285875e+00 | 2.0e+01 | 3.9e+01 | 6.5e+01 | 3.10e+01 | 3.5e+01 | 4.1e+01 | 49 |
| fr | 2001_10 | 1iio:A | 1.2 | 2.3 | -9.420277e+00 | -2.547852e+00 | 8.3e+00 | 2.0e+01 | 7.3e+01 | 9.68e+00 | 3.2e+01 | 3.6e+01 | 84 |
| fr | 2001_10 | 1imu:A | 2.9 | 1.6 | -5.652721e+00 | -3.081106e+00 | 3.7e+00 | 6.5e+00 | 7.5e+01 | 3.02e+00 | 2.9e+01 | 3.1e+01 | 107 |
| fr | 2001_10 | 1jbi:A | 1.1 | 0.7 | -8.614683e+00 | -5.995396e+00 | 2.0e+00 | 6.0e+00 | 7.0e+01 | 4.38e+00 | 1.0e+01 | 1.6e+01 | 100 |
| fr | 2001_10 | 1jcj:B | 19.0 | 3.5 | 1.755597e+00 | 1.075500e+01 | 2.2e+01 | 4.3e+01 | 9.4e+01 | 2.44e+00 | 3.3e+01 | 3.8e+01 | 251 |
| fr | 2001_10 | 1jg5:A | 1.2 | 2.0 | -9.669851e+00 | -7.155823e+00 | 3.6e+00 | 6.0e+00 | 7.6e+01 | 5.48e+00 | 1.4e+01 | 2.2e+01 | 83 |
| fr | 2001_10 | 1jhj:A | 16.2 | 3.5 | -2.346150e+00 | 1.712406e+01 | 2.2e+01 | 3.5e+01 | 8.0e+01 | 3.95e-01 | 7.0e+01 | 7.3e+01 | 161 |
| fr | 2001_10 | 1jid:A | 2.7 | 2.0 | -7.637020e+00 | -2.281725e+00 | 5.3e+00 | 8.8e+00 | 6.9e+01 | 2.17e+00 | 1.6e+01 | 2.3e+01 | 114 |
| fr | 2001_10 | 1jjs:A | 0.6 | 0.7 | -1.454286e+01 | -1.439635e+01 | 2.4e+00 | 7.1e+00 | 1.0e+02 | 1.95e+01 | 3.1e+01 | 3.8e+01 | 42 |
| fr | 2001_10 | 1jtg:B | 1.8 | 2.6 | -4.853934e+00 | 8.347704e-01 | 1.2e+00 | 5.5e+00 | 7.0e+01 | 5.42e+00 | 2.1e+01 | 2.8e+01 | 165 |
| fr | 2001_10 | 1k30:A | 1.6 | 2.0 | 7.264448e-01 | -1.294336e+00 | 5.5e-01 | 1.1e+00 | 6.6e+01 | 2.45e-01 | 1.2e+01 | 1.8e+01 | 363 |
| fr | 2001_10 | THIS_month:psum | 4.4 | 2.1 | 1.2 | 8.7 | 7.2 | 14.4 | 76.0 | 8.0 | 29.2 | 35 | 143.9 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |