| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2001_09 | THIS_month:psum | 3.6 | 2.2 | 18.5 | 9.8 | 16.6 | 19.6 | 38.4 | 3.7 | 24.5 | 26.2 | 228.8 |
| fr | 2001_09 | 1e8p:A | 1.0 | 1.6 | -2.776364e+01 | -1.327686e+01 | 1.3e+01 | 2.8e+01 | 4.8e+01 | 12 | 2.8e+01 | 3.0e+01 | 46 |
| fr | 2001_09 | 1fex:A | 7.3 | 2.8 | 2.320956e+01 | 1.834409e+01 | 7.3e+01 | 7.6e+01 | 8.1e+01 | 0.36 | 7.8e+01 | 7.8e+01 | 59 |
| fr | 2001_09 | 1gd8:A | 5.1 | 3.3 | -9.779516e+00 | 8.129185e-01 | 1.9e+00 | 4.8e+00 | 3.9e+01 | 1.1 | 2.8e+01 | 3.0e+01 | 105 |
| fr | 2001_09 | 1h54:B | 1.4 | 2.0 | -5.092654e+00 | -4.501069e-01 | 1.3e-01 | 4.0e-01 | 1.4e+01 | 3.1 | 3.8e+00 | 5.3e+00 | 754 |
| fr | 2001_09 | 1h6k:A | 1.2 | 2.6 | 1.704701e+00 | 1.189375e-01 | 1.4e-01 | 2.7e-01 | 1.5e+01 | 8.3 | 5.8e+00 | 6.7e+00 | 728 |
| fr | 2001_09 | 1h6p:A | 2.3 | 2.0 | -9.826148e+00 | -6.864368e-01 | 5.3e+00 | 6.9e+00 | 3.2e+01 | 6.6 | 1.4e+01 | 1.6e+01 | 188 |
| fr | 2001_09 | 1i18:A | 0.6 | 0 | -4.698462e+01 | -6.296907e+00 | 7.2e+00 | 1.2e+01 | 1.3e+01 | 3.6 | 0.0e+00 | 0.0e+00 | 97 |
| fr | 2001_09 | 1im4:A | 3.1 | 0 | 3.068885e+01 | -2.952367e+00 | 1.2e+01 | 1.2e+01 | 1.2e+01 | 0.05 | 0.0e+00 | 0.0e+00 | 205 |
| fr | 2001_09 | 1j75:A | 8.3 | 4.7 | -1.090714e+01 | 3.747127e+01 | 9.3e+01 | 9.5e+01 | 9.8e+01 | 0.00 | 9.3e+01 | 9.5e+01 | 57 |
| fr | 2001_09 | 1j9j:A | 2.9 | 2.0 | -7.282433e+00 | 4.731007e-01 | 1.6e+00 | 4.0e+00 | 2.8e+01 | 0.85 | 9.3e+00 | 1.1e+01 | 247 |
| fr | 2001_09 | 1jnx:X | 11.9 | 4.4 | -7.020690e+00 | 1.088940e+01 | 2.8e+01 | 3.4e+01 | 4.2e+01 | 0.00 | 3.7e+01 | 3.9e+01 | 207 |
| fr | 2001_09 | 1jpy:A | 0.4 | 2.6 | -9.050844e+00 | -4.574162e+00 | 0.0e+00 | 2.5e+00 | 5.4e+01 | 1.8 | 1.8e+01 | 2.4e+01 | 121 |
| fr | 2001_09 | 1jql:B | 2.7 | 3.1 | -3.187755e+00 | -3.212713e-02 | 1.2e+01 | 1.4e+01 | 2.7e+01 | 0.50 | 2.4e+01 | 2.4e+01 | 140 |
| fr | 2001_09 | 1jx3:A | 0.6 | 0.7 | -1.388180e+01 | -2.160549e+00 | 4.2e-01 | 8.4e-01 | 1.8e+01 | 15 | 7.1e+00 | 8.4e+00 | 239 |
| fr | 2001_09 | 1jzt:A | 6.1 | 2.3 | -4.464799e+00 | 1.079984e+00 | 1.7e+00 | 4.2e+00 | 5.6e+01 | 2.7 | 2.2e+01 | 2.7e+01 | 240 |
| fr | 2001_09 | THIS_month:psum | 3.6 | 2.2 | 18.5 | 9.8 | 16.6 | 19.6 | 38.4 | 3.7 | 24.5 | 26.2 | 228.8 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |