| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_09 | THIS_month:psum | 8.5 | 3.6 | 4.7 | 10.0 | 24.1 | 31.3 | 85.9 | 3.1 | 42 | 48.3 | 201.5 |
| fr | 2001_09 | 1fex:A | 3.8 | 2.8 | -5.951509e+00 | -6.661573e+00 | 3.9e+01 | 5.1e+01 | 9.0e+01 | 1.61e+01 | 4.9e+01 | 5.9e+01 | 59 |
| fr | 2001_09 | 1gd8:A | 3.7 | 3.3 | -6.490829e+00 | 8.377060e+00 | 8.6e+00 | 1.9e+01 | 9.0e+01 | 2.63e+00 | 2.8e+01 | 3.3e+01 | 105 |
| fr | 2001_09 | 1h54:B | 14.7 | 4.9 | 1.943157e+00 | 3.571914e+00 | 3.8e+00 | 8.4e+00 | 5.1e+01 | 2.00e-01 | 2.4e+01 | 3.0e+01 | 754 |
| fr | 2001_09 | 1h6p:A | 3.1 | 2.6 | 3.698808e+00 | 6.070332e+00 | 5.3e-01 | 2.1e+00 | 9.1e+01 | 8.05e+00 | 2.4e+01 | 3.1e+01 | 188 |
| fr | 2001_09 | 1i18:A | 2.9 | 2.3 | -3.630787e+00 | 2.552114e-01 | 6.2e+00 | 1.5e+01 | 8.1e+01 | 3.01e+00 | 3.0e+01 | 3.6e+01 | 97 |
| fr | 2001_09 | 1im4:A | 2.6 | 3.3 | 2.908712e+00 | 4.619932e-01 | 6.3e+00 | 8.8e+00 | 9.4e+01 | 1.45e-01 | 2.0e+01 | 2.4e+01 | 205 |
| fr | 2001_09 | 1j75:A | 8.7 | 4.6 | -1.071579e+01 | 3.884612e+01 | 8.9e+01 | 9.3e+01 | 1.0e+02 | 8.23e-01 | 8.9e+01 | 9.6e+01 | 57 |
| fr | 2001_09 | 1j9j:A | 11.2 | 3.5 | 6.871297e+00 | 4.974079e+00 | 1.2e+01 | 2.1e+01 | 9.0e+01 | 6.88e-01 | 3.3e+01 | 3.9e+01 | 247 |
| fr | 2001_09 | 1jnx:X | 11.8 | 3.5 | -3.412291e+00 | 1.082213e+01 | 3.0e+01 | 3.3e+01 | 8.6e+01 | 3.89e-02 | 3.7e+01 | 3.9e+01 | 207 |
| fr | 2001_09 | 1jpy:A | 3.5 | 2.8 | -5.707957e+00 | 1.229089e-01 | 1.7e+00 | 3.3e+00 | 8.8e+01 | 6.42e+00 | 3.1e+01 | 4.5e+01 | 121 |
| fr | 2001_09 | 1jql:B | 16.5 | 5.2 | 8.148936e+00 | 1.397652e+01 | 4.4e+01 | 6.6e+01 | 9.5e+01 | 5.96e-05 | 6.9e+01 | 7.8e+01 | 140 |
| fr | 2001_09 | 1jx3:A | 20.0 | 4.4 | -3.403408e+00 | 2.263620e+01 | 4.9e+01 | 5.5e+01 | 7.5e+01 | 2.93e-02 | 7.0e+01 | 7.0e+01 | 239 |
| fr | 2001_09 | THIS_month:psum | 8.5 | 3.6 | 4.7 | 10.0 | 24.1 | 31.3 | 85.9 | 3.1 | 42 | 48.3 | 201.5 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |