| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2001_08 | THIS_month:psum | 2.0 | 2.0 | 14.7 | 3.7 | 8.1 | 12.3 | 41.1 | 29.6 | 17.5 | 20.7 | 176.6 |
| fr | 2001_08 | 1f35:A | 1.5 | 1.6 | -8.066594e+00 | -2.953758e+00 | 1.9e+00 | 5.1e+00 | 4.2e+01 | 1.4 | 1.1e+01 | 1.7e+01 | 157 |
| fr | 2001_08 | 1g2r:A | 1.0 | 2.3 | -8.783722e+00 | -4.907869e+00 | 1.2e+01 | 1.6e+01 | 6.5e+01 | 8.2 | 2.9e+01 | 3.2e+01 | 94 |
| fr | 2001_08 | 1h7y:A | 2.6 | 2.3 | 2.013521e+01 | -1.067983e+00 | 8.9e+00 | 1.0e+01 | 3.8e+01 | 7.4 | 1.3e+01 | 1.5e+01 | 168 |
| fr | 2001_08 | 1h8b:A | 4.1 | 3.5 | 1.323429e+01 | 6.163802e+00 | 3.2e+01 | 4.1e+01 | 4.7e+01 | 0.03 | 4.1e+01 | 4.1e+01 | 73 |
| fr | 2001_08 | 1hi9:A | 4.2 | 3.7 | 3.281550e+01 | 3.075287e+00 | 1.0e+01 | 1.0e+01 | 2.3e+01 | 1.7 | 9.9e+00 | 1.0e+01 | 274 |
| fr | 2001_08 | 1hqb:A | 1.0 | 2.8 | -2.122618e+01 | 5.134040e+00 | 2.5e+01 | 2.9e+01 | 3.5e+01 | 3.8 | 2.6e+01 | 3.0e+01 | 80 |
| fr | 2001_08 | 1hy9:A | 1.8 | 1.6 | -2.545000e+01 | -1.489139e+01 | 2.4e+00 | 1.2e+01 | 5.9e+01 | 99 | 3.7e+01 | 3.9e+01 | 41 |
| fr | 2001_08 | 1i8n:A | 1.8 | 2.0 | -1.907405e+01 | -6.014543e+00 | 7.9e+00 | 1.1e+01 | 3.6e+01 | 2.9 | 1.7e+01 | 1.9e+01 | 89 |
| fr | 2001_08 | 1ihr:A | 0.7 | 2.0 | -1.299574e+01 | -7.697222e+00 | 6.8e+00 | 1.4e+01 | 6.4e+01 | 0.24 | 2.2e+01 | 2.9e+01 | 73 |
| fr | 2001_08 | 1ipg:A | 1.8 | 2.3 | -1.052986e+01 | -6.334836e+00 | 7.1e+00 | 1.4e+01 | 6.8e+01 | 0.41 | 2.6e+01 | 3.3e+01 | 85 |
| fr | 2001_08 | 1j7l:A | 10.4 | 4.6 | -3.663699e+00 | 5.317024e+00 | 1.9e+00 | 5.7e+00 | 5.0e+01 | 0.00 | 3.2e+01 | 4.0e+01 | 263 |
| fr | 2001_08 | 1jb0:B | 0.8 | 2.6 | -9.851593e+00 | -3.979290e-01 | 4.1e-01 | 1.1e+00 | 8.4e+00 | 6.7 | 3.7e+00 | 5.0e+00 | 739 |
| fr | 2001_08 | 1jb0:D | 1.8 | 2.0 | -1.650722e+01 | -2.359629e+00 | 3.6e+00 | 5.1e+00 | 2.7e+01 | 1.8 | 1.8e+01 | 1.9e+01 | 138 |
| fr | 2001_08 | 1jb0:F | 0.6 | 0.7 | -1.053103e+01 | -3.800030e+00 | 0.0e+00 | 0.0e+00 | 4.1e+01 | 0.97 | 9.2e+00 | 1.6e+01 | 141 |
| fr | 2001_08 | 1jb0:I | -0.0 | 0.7 | -1.796471e+01 | -1.607364e+01 | 5.3e+00 | 1.8e+01 | 8.9e+01 | 194 | 3.2e+01 | 4.2e+01 | 38 |
| fr | 2001_08 | 1jb0:J | 1.0 | 0 | -4.072000e+01 | -1.489756e+01 | 2.0e+01 | 3.2e+01 | 3.7e+01 | 9.8 | 0.0e+00 | 0.0e+00 | 41 |
| fr | 2001_08 | 1jb0:L | 0.4 | 1.2 | -2.655635e+01 | -3.704498e+00 | 2.6e+00 | 7.9e+00 | 1.5e+01 | 15 | 1.1e+01 | 1.2e+01 | 151 |
| fr | 2001_08 | 1jb0:M | 0.3 | 0.7 | -2.776364e+01 | -1.970323e+01 | 3.2e+01 | 3.2e+01 | 7.1e+01 | 272 | 3.2e+01 | 3.5e+01 | 31 |
| fr | 2001_08 | 1jc7:A | 0.9 | 2.0 | -2.545000e+01 | -4.734884e+00 | 1.6e+00 | 6.2e+00 | 1.9e+01 | 1.2 | 9.3e+00 | 1.2e+01 | 129 |
| fr | 2001_08 | 1je5:B | 3.4 | 2.3 | 1.819095e+00 | 2.029947e+00 | 1.6e+00 | 3.3e+00 | 4.9e+01 | 6.6 | 1.4e+01 | 1.7e+01 | 182 |
| fr | 2001_08 | 1jey:A | 4.3 | 3.7 | -5.819616e+00 | 7.810885e-01 | 6.1e-01 | 3.2e+00 | 1.9e+01 | 0.13 | 6.5e+00 | 9.1e+00 | 493 |
| fr | 2001_08 | 1jey:B | 2.5 | 2.8 | 5.771979e+00 | -3.433471e-01 | 0.0e+00 | 3.8e-01 | 1.4e+01 | 15 | 5.1e+00 | 5.8e+00 | 530 |
| fr | 2001_08 | 1jjd:A | 0.0 | 0 | -4.072000e+01 | -1.174615e+01 | 3.8e+00 | 7.7e+00 | 2.9e+01 | 34 | 0.0e+00 | 0.0e+00 | 52 |
| fr | 2001_08 | THIS_month:psum | 2.0 | 2.0 | 14.7 | 3.7 | 8.1 | 12.3 | 41.1 | 29.6 | 17.5 | 20.7 | 176.6 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |