| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2001_08 | THIS_month:psum | 1.4 | 1.8 | 14.9 | 4.4 | 5.2 | 9.3 | 35.5 | 29.6 | 14.6 | 18.0 | 176.6 |
| fr | 2001_08 | 1f35:A | 1.5 | 1.6 | -8.066594e+00 | -3.014567e+00 | 1.3e+00 | 4.5e+00 | 4.2e+01 | 1.4 | 6.4e+00 | 1.3e+01 | 157 |
| fr | 2001_08 | 1g2r:A | 1.0 | 2.0 | -8.783722e+00 | -6.497872e+00 | 6.4e+00 | 9.6e+00 | 6.5e+01 | 8.2 | 2.9e+01 | 3.2e+01 | 94 |
| fr | 2001_08 | 1h7y:A | 2.4 | 2.3 | 1.338487e+01 | -1.067983e+00 | 3.0e+00 | 4.8e+00 | 2.4e+01 | 7.4 | 1.3e+01 | 1.5e+01 | 168 |
| fr | 2001_08 | 1h8b:A | 4.1 | 3.5 | 8.065806e+00 | 3.756613e+00 | 3.0e+01 | 4.0e+01 | 4.7e+01 | 0.03 | 3.7e+01 | 4.0e+01 | 73 |
| fr | 2001_08 | 1hi9:A | 4.2 | 3.7 | 3.281550e+01 | -1.893334e+00 | 1.0e+01 | 1.0e+01 | 1.2e+01 | 1.7 | 9.9e+00 | 1.0e+01 | 274 |
| fr | 2001_08 | 1hqb:A | 1.0 | 2.8 | -2.129440e+01 | 4.615833e+00 | 2.5e+01 | 2.9e+01 | 3.5e+01 | 3.8 | 2.6e+01 | 3.0e+01 | 80 |
| fr | 2001_08 | 1hy9:A | 1.3 | 1.6 | -2.545000e+01 | -1.489290e+01 | 2.4e+00 | 9.8e+00 | 5.9e+01 | 99 | 3.4e+01 | 3.9e+01 | 41 |
| fr | 2001_08 | 1i8n:A | 0.1 | 1.2 | -2.545000e+01 | -6.859494e+00 | 3.4e+00 | 7.9e+00 | 2.7e+01 | 2.9 | 1.1e+01 | 1.6e+01 | 89 |
| fr | 2001_08 | 1ihr:A | 0.7 | 2.0 | -1.850909e+01 | -8.150047e+00 | 6.8e+00 | 1.4e+01 | 4.5e+01 | 0.24 | 2.1e+01 | 2.7e+01 | 73 |
| fr | 2001_08 | 1ipg:A | 1.0 | 1.6 | -2.349052e+01 | -6.941368e+00 | 7.1e+00 | 1.4e+01 | 3.1e+01 | 0.41 | 1.9e+01 | 2.4e+01 | 85 |
| fr | 2001_08 | 1j7l:A | 6.0 | 4.1 | -3.663699e+00 | 4.865587e+00 | 3.8e-01 | 1.9e+00 | 5.0e+01 | 0.00 | 3.1e+01 | 4.0e+01 | 263 |
| fr | 2001_08 | 1jb0:B | 0.4 | 2.3 | -9.851602e+00 | -3.979290e-01 | 4.1e-01 | 1.1e+00 | 8.4e+00 | 6.7 | 3.7e+00 | 4.5e+00 | 739 |
| fr | 2001_08 | 1jb0:D | 1.8 | 1.2 | -1.650722e+01 | -2.359629e+00 | 0.0e+00 | 1.4e+00 | 2.7e+01 | 1.8 | 1.8e+01 | 1.9e+01 | 138 |
| fr | 2001_08 | 1jb0:F | 0.5 | 0.7 | -1.053103e+01 | -3.898823e+00 | 0.0e+00 | 0.0e+00 | 4.1e+01 | 0.97 | 8.5e+00 | 1.6e+01 | 141 |
| fr | 2001_08 | 1jb0:I | -0.0 | 0.7 | -1.796471e+01 | -1.607365e+01 | 5.3e+00 | 1.6e+01 | 8.9e+01 | 194 | 3.2e+01 | 4.2e+01 | 38 |
| fr | 2001_08 | 1jb0:J | 0.1 | 0 | -4.362857e+01 | -1.489756e+01 | 7.3e+00 | 1.7e+01 | 3.4e+01 | 9.8 | 0.0e+00 | 0.0e+00 | 41 |
| fr | 2001_08 | 1jb0:L | 0.1 | 0.7 | -2.655637e+01 | -3.711101e+00 | 2.0e+00 | 7.9e+00 | 1.5e+01 | 15 | 9.3e+00 | 1.2e+01 | 151 |
| fr | 2001_08 | 1jb0:M | -0.0 | 0 | -2.776364e+01 | -1.970323e+01 | 3.2e+00 | 9.7e+00 | 7.1e+01 | 272 | 0.0e+00 | 0.0e+00 | 31 |
| fr | 2001_08 | 1jc7:A | 0.5 | 2.0 | -2.545000e+01 | -4.734884e+00 | 1.6e+00 | 6.2e+00 | 1.9e+01 | 1.2 | 9.3e+00 | 1.2e+01 | 129 |
| fr | 2001_08 | 1je5:B | 3.4 | 2.3 | -1.850909e+01 | -2.088841e+00 | 5.5e-01 | 3.3e+00 | 1.8e+01 | 6.6 | 1.2e+01 | 1.3e+01 | 182 |
| fr | 2001_08 | 1jey:A | 1.0 | 3.7 | -5.819616e+00 | -1.101215e+00 | 0.0e+00 | 0.0e+00 | 1.6e+01 | 0.13 | 4.3e+00 | 5.9e+00 | 493 |
| fr | 2001_08 | 1jey:B | 1.5 | 2.8 | 5.631430e+00 | -6.303527e-01 | 0.0e+00 | 1.9e-01 | 1.4e+01 | 15 | 3.6e+00 | 4.0e+00 | 530 |
| fr | 2001_08 | 1jjd:A | 0.0 | 0 | -4.072000e+01 | -1.174615e+01 | 3.8e+00 | 5.8e+00 | 2.9e+01 | 34 | 0.0e+00 | 0.0e+00 | 52 |
| fr | 2001_08 | THIS_month:psum | 1.4 | 1.8 | 14.9 | 4.4 | 5.2 | 9.3 | 35.5 | 29.6 | 14.6 | 18.0 | 176.6 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |