| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_08 | THIS_month:psum | 5.6 | 3.1 | 9.4 | 5.5 | 21.0 | 27.2 | 82.6 | 6.0 | 36.3 | 42 | 180.0 |
| fr | 2001_08 | 1g2r:A | 1.6 | 3.5 | 2.264912e+00 | 7.444035e-01 | 4.3e+00 | 1.1e+01 | 9.1e+01 | 3.27e+00 | 3.4e+01 | 3.7e+01 | 94 |
| fr | 2001_08 | 1h7y:A | 1.4 | 2.6 | -3.319688e+00 | 5.838179e-01 | 0.0e+00 | 6.0e-01 | 9.1e+01 | 7.53e-01 | 1.7e+01 | 2.5e+01 | 168 |
| fr | 2001_08 | 1h8b:A | 8.0 | 3.3 | 3.223509e+00 | 1.742972e+00 | 4.5e+01 | 5.5e+01 | 9.2e+01 | 3.04e-01 | 5.5e+01 | 6.2e+01 | 73 |
| fr | 2001_08 | 1hi9:A | 6.3 | 3.1 | 2.842370e+00 | 2.965689e+00 | 5.1e+00 | 1.1e+01 | 7.7e+01 | 3.19e-01 | 3.2e+01 | 3.8e+01 | 274 |
| fr | 2001_08 | 1hy9:A | 1.8 | 2.0 | -1.607368e+01 | -1.488501e+01 | 1.5e+01 | 2.7e+01 | 9.3e+01 | 2.21e+01 | 2.7e+01 | 3.9e+01 | 41 |
| fr | 2001_08 | 1ihr:A | 2.7 | 3.1 | -8.982353e+00 | 6.323256e+00 | 8.2e+00 | 1.9e+01 | 9.3e+01 | 5.66e-01 | 3.4e+01 | 3.8e+01 | 73 |
| fr | 2001_08 | 1ipg:A | 11.2 | 4.1 | 1.545896e+01 | 1.716433e+01 | 5.6e+01 | 7.1e+01 | 9.1e+01 | 1.65e+00 | 7.5e+01 | 8.0e+01 | 85 |
| fr | 2001_08 | 1j7l:A | 11.4 | 4.2 | -5.709361e-02 | 7.170944e+00 | 1.6e+01 | 2.3e+01 | 9.2e+01 | 1.51e-02 | 4.2e+01 | 4.9e+01 | 263 |
| fr | 2001_08 | 1jb0:B | 5.3 | 3.9 | 2.781917e+00 | 1.732198e+00 | 4.1e-01 | 8.1e-01 | 5.9e+01 | 6.33e-02 | 1.0e+01 | 1.2e+01 | 739 |
| fr | 2001_08 | 1jb0:D | 4.0 | 2.3 | -2.446365e+00 | -3.350280e-02 | 2.9e+00 | 6.5e+00 | 8.8e+01 | 2.56e+00 | 2.1e+01 | 3.4e+01 | 138 |
| fr | 2001_08 | 1jb0:F | 1.7 | 2.6 | -3.381712e+00 | 4.570953e+00 | 7.1e-01 | 4.3e+00 | 9.6e+01 | 2.87e-01 | 1.8e+01 | 2.0e+01 | 141 |
| fr | 2001_08 | 1jb0:I | 3.6 | 3.7 | 2.599346e+00 | 1.547372e+01 | 5.5e+01 | 7.4e+01 | 7.6e+01 | 2.08e+01 | 6.6e+01 | 7.1e+01 | 38 |
| fr | 2001_08 | 1jb0:J | 3.3 | 3.7 | 3.030804e+01 | 8.474947e-02 | 5.9e+01 | 6.1e+01 | 6.8e+01 | 3.01e+01 | 6.1e+01 | 6.1e+01 | 41 |
| fr | 2001_08 | 1jb0:K | 3.4 | 2.8 | -1.489756e+01 | -1.069933e+00 | 3.5e+01 | 3.9e+01 | 8.9e+01 | 6.38e+00 | 3.9e+01 | 4.1e+01 | 46 |
| fr | 2001_08 | 1jb0:L | 5.2 | 2.8 | -1.737636e+00 | 2.583353e+00 | 2.6e+00 | 5.3e+00 | 7.9e+01 | 3.02e+00 | 2.3e+01 | 2.8e+01 | 151 |
| fr | 2001_08 | 1jb0:M | 2.7 | 3.1 | 3.097922e+01 | 1.675084e+01 | 7.1e+01 | 7.1e+01 | 9.0e+01 | 2.25e+01 | 6.8e+01 | 7.4e+01 | 31 |
| fr | 2001_08 | 1jc7:A | 2.8 | 2.6 | -6.340828e+00 | 8.480785e-02 | 1.6e+01 | 2.5e+01 | 7.4e+01 | 2.75e+00 | 2.2e+01 | 3.5e+01 | 129 |
| fr | 2001_08 | 1je5:B | 2.0 | 2.0 | 4.080928e+00 | 4.964587e+00 | 1.6e+00 | 3.3e+00 | 8.6e+01 | 1.28e+00 | 1.7e+01 | 2.1e+01 | 182 |
| fr | 2001_08 | 1jey:A | 17.3 | 3.7 | -2.913275e+00 | 5.801006e+00 | 1.9e+01 | 2.2e+01 | 3.8e+01 | 7.87e-02 | 2.8e+01 | 3.1e+01 | 493 |
| fr | 2001_08 | 1jey:B | 19.3 | 3.9 | 3.432205e-01 | 6.045297e+00 | 1.5e+01 | 2.0e+01 | 8.6e+01 | 1.44e+00 | 2.7e+01 | 3.0e+01 | 530 |
| fr | 2001_08 | 1jjd:A | 3.6 | 2.6 | -1.257877e+01 | -8.816684e+00 | 1.5e+01 | 2.3e+01 | 8.7e+01 | 7.62e+00 | 4.8e+01 | 5.6e+01 | 52 |
| fr | 2001_08 | THIS_month:psum | 5.6 | 3.1 | 9.4 | 5.5 | 21.0 | 27.2 | 82.6 | 6.0 | 36.3 | 42 | 180.0 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |