| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2001_07 | THIS_month:psum | 1.9 | 2.2 | 7.7 | 13.8 | 16.8 | 22.1 | 43.9 | 16.2 | 26.0 | 29.0 | 130.5 |
| fr | 2001_07 | 1dcj:A | 2.6 | 2.8 | 7.706172e+00 | -6.801181e+00 | 2.1e+01 | 2.7e+01 | 4.2e+01 | 0.93 | 2.3e+01 | 3.1e+01 | 81 |
| fr | 2001_07 | 1e4s:A | 4.7 | 3.7 | -1.850909e+01 | 1.626357e+01 | 8.9e+01 | 9.2e+01 | 9.2e+01 | 4.1 | 8.3e+01 | 9.2e+01 | 36 |
| fr | 2001_07 | 1e4t:A | 0.6 | 0.7 | -3.393333e+01 | -1.650811e+01 | 1.1e+01 | 2.4e+01 | 4.9e+01 | 115 | 2.4e+01 | 2.4e+01 | 37 |
| fr | 2001_07 | 1e5r:A | 1.1 | 2.6 | -1.110345e+01 | -2.217662e+00 | 3.8e-01 | 1.5e+00 | 2.1e+01 | 6.5 | 7.7e+00 | 1.0e+01 | 260 |
| fr | 2001_07 | 1faz:A | 0.9 | 2.3 | -1.794455e+01 | -6.660560e-03 | 8.2e-01 | 8.2e-01 | 2.8e+01 | 6.8 | 1.7e+01 | 2.0e+01 | 122 |
| fr | 2001_07 | 1h5p:A | 0.6 | 1.6 | -2.106207e+01 | -6.397381e+00 | 1.1e+00 | 7.4e+00 | 3.1e+01 | 2.2 | 1.5e+01 | 1.6e+01 | 95 |
| fr | 2001_07 | 1hq0:A | 1.1 | 2.3 | -7.635000e+00 | 1.047244e+00 | 0.0e+00 | 0.0e+00 | 2.7e+01 | 7.1 | 7.8e+00 | 8.5e+00 | 295 |
| fr | 2001_07 | 1htj:F | 2.6 | 3.3 | -1.272500e+01 | 2.347549e+00 | 1.1e+00 | 2.8e+00 | 2.7e+01 | 0.20 | 1.7e+01 | 1.9e+01 | 178 |
| fr | 2001_07 | 1i1h:A | 1.2 | 1.2 | -1.607368e+01 | -2.372034e+00 | 1.4e+00 | 2.9e+00 | 1.8e+01 | 1.9 | 5.7e+00 | 8.6e+00 | 209 |
| fr | 2001_07 | 1i3j:A | 1.6 | 1.6 | -1.018000e+01 | -6.319770e+00 | 0.0e+00 | 2.1e+00 | 6.2e+01 | 0.94 | 2.0e+01 | 2.0e+01 | 96 |
| fr | 2001_07 | 1i5n:A | 7.6 | 3.1 | -1.046096e+00 | 1.422933e+01 | 3.2e+01 | 3.5e+01 | 4.3e+01 | 0.68 | 4.1e+01 | 4.2e+01 | 124 |
| fr | 2001_07 | 1ijy:A | 1.0 | 1.2 | -1.607208e+01 | -4.801309e+00 | 5.7e+00 | 1.1e+01 | 3.1e+01 | 23 | 1.4e+01 | 2.0e+01 | 122 |
| fr | 2001_07 | 1jei:A | 0.2 | 1.2 | -1.740416e+01 | -1.129115e+01 | 1.1e+01 | 2.6e+01 | 6.6e+01 | 0.59 | 1.3e+01 | 2.1e+01 | 53 |
| fr | 2001_07 | 1jek:A | 1.9 | 2.6 | -2.181429e+01 | 1.025607e+01 | 2.0e+01 | 4.5e+01 | 7.0e+01 | 77 | 4.8e+01 | 5.0e+01 | 40 |
| fr | 2001_07 | 1jek:B | 3.1 | 3.9 | -2.443200e+01 | 3.866867e+01 | 7.4e+01 | 7.4e+01 | 7.4e+01 | 3.0 | 7.4e+01 | 7.4e+01 | 34 |
| fr | 2001_07 | 1jfy:A | 0.5 | 2.0 | -9.076018e+00 | -1.709223e+00 | 6.5e-01 | 3.3e+00 | 2.2e+01 | 9.9 | 6.5e+00 | 8.8e+00 | 306 |
| fr | 2001_07 | THIS_month:psum | 1.9 | 2.2 | 7.7 | 13.8 | 16.8 | 22.1 | 43.9 | 16.2 | 26.0 | 29.0 | 130.5 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |