| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_07 | THIS_month:psum | 5.7 | 3.1 | 7.2 | 9.0 | 22.6 | 30.4 | 88.4 | 4.6 | 39.5 | 46.3 | 142.6 |
| fr | 2001_07 | 1dcj:A | 4.3 | 3.3 | 1.118000e+00 | 5.506485e+00 | 1.2e+01 | 2.8e+01 | 7.8e+01 | 3.04e-01 | 3.6e+01 | 4.6e+01 | 81 |
| fr | 2001_07 | 1e4s:A | 5.0 | 3.7 | -1.696667e+01 | 2.350802e+01 | 8.6e+01 | 9.4e+01 | 1.0e+02 | 3.88e-03 | 8.6e+01 | 9.2e+01 | 36 |
| fr | 2001_07 | 1e4t:A | 5.2 | 3.9 | 1.582825e+01 | 1.540045e+01 | 7.6e+01 | 8.4e+01 | 1.0e+02 | 1.78e+01 | 8.1e+01 | 8.9e+01 | 37 |
| fr | 2001_07 | 1e5r:A | 3.4 | 3.1 | -2.835849e+00 | -1.391446e+00 | 7.7e-01 | 2.3e+00 | 8.2e+01 | 1.94e-01 | 1.3e+01 | 1.8e+01 | 260 |
| fr | 2001_07 | 1faz:A | 4.7 | 3.9 | 4.770515e+00 | 2.725226e+00 | 8.2e+00 | 1.4e+01 | 8.4e+01 | 4.65e+00 | 2.8e+01 | 3.5e+01 | 122 |
| fr | 2001_07 | 1h5p:A | 1.7 | 2.0 | -6.786667e+00 | -2.898737e+00 | 4.2e+00 | 8.4e+00 | 9.5e+01 | 1.69e+00 | 2.8e+01 | 3.1e+01 | 95 |
| fr | 2001_07 | 1hq0:A | 4.2 | 2.3 | -2.545000e+00 | 9.154531e-01 | 2.4e+00 | 4.4e+00 | 8.1e+01 | 1.03e+00 | 1.7e+01 | 2.5e+01 | 295 |
| fr | 2001_07 | 1i1h:A | 7.8 | 2.8 | -8.498317e-01 | 2.943350e+00 | 9.6e+00 | 1.8e+01 | 9.4e+01 | 5.42e-01 | 3.2e+01 | 3.8e+01 | 209 |
| fr | 2001_07 | 1i3j:A | 1.8 | 2.0 | -8.483333e+00 | -4.300309e+00 | 4.2e+00 | 1.0e+01 | 7.5e+01 | 8.98e+00 | 2.2e+01 | 2.6e+01 | 96 |
| fr | 2001_07 | 1ijy:A | 1.5 | 2.6 | -5.587569e+00 | -1.559782e+00 | 3.3e+00 | 8.2e+00 | 8.9e+01 | 4.53e+00 | 2.3e+01 | 3.0e+01 | 122 |
| fr | 2001_07 | 1jei:A | 3.4 | 3.1 | -3.949304e+00 | -4.941426e-01 | 2.8e+01 | 4.0e+01 | 9.2e+01 | 1.56e+01 | 4.5e+01 | 5.5e+01 | 53 |
| fr | 2001_07 | 1jfy:A | 26.2 | 5.6 | -1.862179e+00 | 1.261155e+01 | 3.7e+01 | 5.4e+01 | 9.1e+01 | 2.58e-01 | 6.3e+01 | 7.1e+01 | 306 |
| fr | 2001_07 | THIS_month:psum | 5.7 | 3.1 | 7.2 | 9.0 | 22.6 | 30.4 | 88.4 | 4.6 | 39.5 | 46.3 | 142.6 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |