| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2001_07 | THIS_month:psum | 4.2 | 2.4 | 13.0 | 9.9 | 18.0 | 23.5 | 83.2 | 4.6 | 33.8 | 40.9 | 142.6 |
| fr | 2001_07 | 1dcj:A | 4.2 | 1.6 | -3.004921e+00 | -3.584962e-01 | 8.6e+00 | 2.1e+01 | 7.3e+01 | 3.04e-01 | 2.8e+01 | 4.0e+01 | 81 |
| fr | 2001_07 | 1e4s:A | 5.0 | 3.7 | -1.745143e+01 | 1.397814e+01 | 8.1e+01 | 9.4e+01 | 9.7e+01 | 3.88e-03 | 8.3e+01 | 9.2e+01 | 36 |
| fr | 2001_07 | 1e4t:A | 5.2 | 3.9 | 1.301526e+01 | 1.222770e+01 | 7.6e+01 | 8.4e+01 | 1.0e+02 | 1.78e+01 | 7.8e+01 | 8.9e+01 | 37 |
| fr | 2001_07 | 1e5r:A | 1.2 | 2.0 | -3.700091e+00 | -1.906139e+00 | 0.0e+00 | 3.8e-01 | 6.3e+01 | 1.94e-01 | 1.2e+01 | 1.4e+01 | 260 |
| fr | 2001_07 | 1faz:A | 0.6 | 2.0 | -5.925933e+00 | -2.270552e+00 | 8.2e-01 | 4.1e+00 | 7.5e+01 | 4.65e+00 | 2.2e+01 | 2.5e+01 | 122 |
| fr | 2001_07 | 1h5p:A | 0.9 | 0.7 | -6.786667e+00 | -5.020357e+00 | 2.1e+00 | 4.2e+00 | 9.5e+01 | 1.69e+00 | 1.4e+01 | 2.2e+01 | 95 |
| fr | 2001_07 | 1hq0:A | 0.9 | 1.2 | -2.545000e+00 | -2.290793e-01 | 0.0e+00 | 6.8e-01 | 8.1e+01 | 1.03e+00 | 9.5e+00 | 1.8e+01 | 295 |
| fr | 2001_07 | 1i1h:A | 2.5 | 1.6 | -2.552877e+00 | 1.147835e+00 | 9.6e+00 | 1.8e+01 | 8.7e+01 | 5.42e-01 | 2.8e+01 | 3.8e+01 | 209 |
| fr | 2001_07 | 1i3j:A | 0.9 | 2.0 | -8.483333e+00 | -6.301298e+00 | 0.0e+00 | 0.0e+00 | 7.5e+01 | 8.98e+00 | 2.2e+01 | 2.6e+01 | 96 |
| fr | 2001_07 | 1ijy:A | 1.1 | 2.6 | -6.313325e+00 | -4.456676e+00 | 0.0e+00 | 8.2e-01 | 7.0e+01 | 4.53e+00 | 1.5e+01 | 1.4e+01 | 122 |
| fr | 2001_07 | 1jei:A | 2.0 | 2.6 | -1.111841e+01 | -1.139347e+01 | 1.9e+00 | 1.9e+00 | 9.2e+01 | 1.56e+01 | 3.2e+01 | 4.2e+01 | 53 |
| fr | 2001_07 | 1jfy:A | 26.2 | 5.6 | -1.862179e+00 | 1.261155e+01 | 3.7e+01 | 5.4e+01 | 9.1e+01 | 2.58e-01 | 6.3e+01 | 7.1e+01 | 306 |
| fr | 2001_07 | THIS_month:psum | 4.2 | 2.4 | 13.0 | 9.9 | 18.0 | 23.5 | 83.2 | 4.6 | 33.8 | 40.9 | 142.6 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |