| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2001_06 | THIS_month:psum | 2.2 | 1.8 | 15.8 | 5.4 | 7.1 | 11.3 | 33.8 | 17.0 | 18.6 | 21.0 | 179.3 |
| fr | 2001_06 | 1e44:B | 4.2 | 1.6 | -1.532903e+01 | 6.827607e+00 | 3.1e+00 | 8.3e+00 | 3.9e+01 | 8.1 | 3.4e+01 | 3.6e+01 | 96 |
| fr | 2001_06 | 1f45:B | 3.0 | 2.8 | -1.970323e+01 | 6.084105e+00 | 0.0e+00 | 3.8e+00 | 2.3e+01 | 1.2 | 1.8e+01 | 1.8e+01 | 133 |
| fr | 2001_06 | 1f46:A | 0.2 | 0.7 | -2.435956e+01 | -3.712183e+00 | 7.2e-01 | 4.3e+00 | 1.7e+01 | 17 | 1.2e+01 | 1.7e+01 | 139 |
| fr | 2001_06 | 1gd5:A | 1.6 | 2.3 | -2.836597e+00 | 3.500338e+00 | 1.5e+00 | 2.3e+00 | 4.4e+01 | 3.2 | 1.8e+01 | 2.2e+01 | 130 |
| fr | 2001_06 | 1h4u:A | 2.8 | 1.6 | -1.696667e+01 | -2.402656e+00 | 1.2e+00 | 2.4e+00 | 1.5e+01 | 6e-06 | 8.6e+00 | 9.8e+00 | 245 |
| fr | 2001_06 | 1h9e:A | 0.3 | 1.2 | -1.908317e+01 | -1.084113e+01 | 1.1e+01 | 1.4e+01 | 5.7e+01 | 1.4 | 3.0e+01 | 4.1e+01 | 56 |
| fr | 2001_06 | 1h9f:A | 0.4 | 2.3 | -1.705254e+01 | -1.004287e+01 | 5.3e+00 | 1.1e+01 | 6.1e+01 | 7.5 | 3.3e+01 | 3.9e+01 | 57 |
| fr | 2001_06 | 1hgz:A | -0.0 | 0 | -4.072000e+01 | -1.327826e+01 | 6.5e+00 | 1.5e+01 | 3.3e+01 | 17 | 0.0e+00 | 0.0e+00 | 46 |
| fr | 2001_06 | 1ho8:A | 0.9 | 0.7 | -1.908649e+01 | -8.767486e-02 | 1.1e+00 | 3.1e+00 | 7.2e+00 | 30 | 3.6e+00 | 3.6e+00 | 447 |
| fr | 2001_06 | 1hs6:A | 2.9 | 2.3 | -1.809562e+00 | 4.187912e-01 | 1.6e-01 | 1.6e-01 | 1.9e+01 | 0.56 | 7.9e+00 | 1.0e+01 | 610 |
| fr | 2001_06 | 1i8u:A | 1.8 | 2.6 | -1.525145e+01 | -1.665478e+00 | 1.6e+00 | 5.3e+00 | 2.0e+01 | 4.8 | 1.3e+01 | 1.7e+01 | 189 |
| fr | 2001_06 | 1iaj:A | 0.9 | 0 | -1.489756e+01 | -1.721795e+00 | 0.0e+00 | 0.0e+00 | 1.6e+01 | 1.7 | 0.0e+00 | 0.0e+00 | 253 |
| fr | 2001_06 | 1iby:A | 9.9 | 4.7 | 1.587670e+01 | 1.169519e+01 | 1.9e+01 | 3.2e+01 | 9.4e+01 | 4e-39 | 6.0e+01 | 6.2e+01 | 112 |
| fr | 2001_06 | 1iij:A | 1.3 | 2.8 | -3.214737e+01 | -1.745143e+01 | 4.0e+01 | 4.6e+01 | 5.4e+01 | 199 | 4.6e+01 | 4.6e+01 | 35 |
| fr | 2001_06 | 1im3:D | 0.2 | 0 | -3.817500e+01 | -6.429474e+00 | 4.2e+00 | 1.4e+01 | 1.7e+01 | 14 | 0.0e+00 | 0.0e+00 | 95 |
| fr | 2001_06 | 1j79:A | 2.7 | 2.8 | -1.908240e+01 | -1.071646e+00 | 5.8e+00 | 7.6e+00 | 9.4e+00 | 0.02 | 7.6e+00 | 8.2e+00 | 342 |
| fr | 2001_06 | 1j7r:A | 6.7 | 3.7 | -1.109292e+01 | 6.518756e+00 | 3.2e+01 | 4.4e+01 | 7.1e+01 | 0.01 | 4.3e+01 | 4.7e+01 | 77 |
| fr | 2001_06 | 1j8r:A | 1.5 | 2.3 | -2.442347e+01 | -6.159849e-01 | 1.6e+00 | 2.6e+00 | 1.3e+01 | 13 | 9.8e+00 | 9.8e+00 | 193 |
| fr | 2001_06 | 1j98:A | 1.5 | 1.6 | -1.196520e+01 | 3.063230e+00 | 6.5e-01 | 6.5e-01 | 3.3e+01 | 6.1 | 9.2e+00 | 1.3e+01 | 153 |
| fr | 2001_06 | THIS_month:psum | 2.2 | 1.8 | 15.8 | 5.4 | 7.1 | 11.3 | 33.8 | 17.0 | 18.6 | 21.0 | 179.3 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |