| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_06 | THIS_month:psum | 6.3 | 3.2 | 8.6 | 9.3 | 16.3 | 25.8 | 86.3 | 5.2 | 43.4 | 50.1 | 170 |
| fr | 2001_06 | 1e44:B | 3.5 | 2.3 | -6.141528e+00 | -4.652222e+00 | 5.2e+00 | 1.1e+01 | 8.6e+01 | 5.59e+00 | 2.5e+01 | 3.5e+01 | 96 |
| fr | 2001_06 | 1f45:B | 4.1 | 2.8 | -5.311289e+00 | 1.207810e+01 | 1.1e+01 | 1.9e+01 | 8.6e+01 | 1.73e+00 | 5.6e+01 | 6.4e+01 | 133 |
| fr | 2001_06 | 1f46:A | 3.2 | 3.1 | -1.503694e+00 | 2.652085e+00 | 5.8e+00 | 9.4e+00 | 9.3e+01 | 1.50e+00 | 2.4e+01 | 2.8e+01 | 139 |
| fr | 2001_06 | 1gd5:A | 1.7 | 2.3 | -9.627623e-01 | 2.598421e-01 | 2.3e+00 | 6.2e+00 | 6.7e+01 | 4.53e+00 | 2.2e+01 | 3.2e+01 | 130 |
| fr | 2001_06 | 1h4u:A | 10.2 | 4.2 | -3.231746e+00 | 1.297581e+01 | 1.3e+01 | 2.4e+01 | 7.7e+01 | 1.60e+00 | 5.9e+01 | 6.7e+01 | 245 |
| fr | 2001_06 | 1h9e:A | 2.0 | 2.8 | -1.001099e+01 | -7.699194e+00 | 7.1e+00 | 2.1e+01 | 8.9e+01 | 8.99e+00 | 3.9e+01 | 4.3e+01 | 56 |
| fr | 2001_06 | 1h9f:A | 2.6 | 2.8 | -1.056277e+01 | -4.962596e+00 | 1.6e+01 | 2.5e+01 | 9.8e+01 | 1.04e+01 | 3.2e+01 | 4.7e+01 | 57 |
| fr | 2001_06 | 1hgz:A | 6.4 | 4.1 | 5.918439e+00 | 1.337188e+01 | 5.2e+01 | 8.5e+01 | 9.8e+01 | 1.60e+01 | 8.0e+01 | 8.7e+01 | 46 |
| fr | 2001_06 | 1ho8:A | 20.8 | 4.2 | 6.919294e-01 | 6.908111e+00 | 2.0e+00 | 5.1e+00 | 9.7e+01 | 6.84e-02 | 4.3e+01 | 4.9e+01 | 447 |
| fr | 2001_06 | 1hs6:A | 14.1 | 4.2 | 3.572528e+00 | 1.090317e+00 | 3.6e+00 | 8.0e+00 | 4.4e+01 | 1.04e-02 | 2.4e+01 | 2.7e+01 | 610 |
| fr | 2001_06 | 1i8u:A | 4.6 | 2.6 | -3.800746e+00 | 3.092639e+00 | 7.4e+00 | 1.1e+01 | 8.4e+01 | 7.32e+00 | 3.0e+01 | 3.4e+01 | 189 |
| fr | 2001_06 | 1iaj:A | 2.5 | 2.0 | -3.116327e+00 | 1.608681e+00 | 4.0e-01 | 1.2e+00 | 7.7e+01 | 6.16e-01 | 1.4e+01 | 2.1e+01 | 253 |
| fr | 2001_06 | 1iby:A | 10.2 | 4.7 | 2.058781e+01 | 2.180947e+01 | 1.4e+01 | 3.3e+01 | 9.8e+01 | 1.68e-06 | 7.5e+01 | 7.6e+01 | 112 |
| fr | 2001_06 | 1iij:A | 4.1 | 3.7 | 1.236913e+01 | 2.759954e+01 | 6.6e+01 | 7.7e+01 | 9.7e+01 | 1.71e+01 | 8.0e+01 | 8.3e+01 | 35 |
| fr | 2001_06 | 1im3:D | 2.5 | 2.6 | -7.098300e+00 | -1.515944e+00 | 5.3e+00 | 9.5e+00 | 9.1e+01 | 8.52e+00 | 3.1e+01 | 4.1e+01 | 95 |
| fr | 2001_06 | 1j7r:A | 9.0 | 3.9 | -7.745113e+00 | 9.191539e+00 | 5.1e+01 | 6.8e+01 | 1.0e+02 | 1.39e-01 | 6.1e+01 | 6.9e+01 | 77 |
| fr | 2001_06 | THIS_month:psum | 6.3 | 3.2 | 8.6 | 9.3 | 16.3 | 25.8 | 86.3 | 5.2 | 43.4 | 50.1 | 170 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |