| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2001_05 | THIS_month:psum | 2.9 | 1.9 | 4.8 | 5.5 | 8.0 | 11.8 | 43.3 | 13.5 | 18.2 | 21.2 | 182.8 |
| fr | 2001_05 | 1ews:A | 1.3 | 1.6 | -3.214737e+01 | -1.908750e+01 | 0.0e+00 | 3.1e+00 | 5.9e+01 | 20 | 4.4e+01 | 4.7e+01 | 32 |
| fr | 2001_05 | 1f08:A | 0.7 | 2.3 | -9.695238e+00 | -3.082074e+00 | 0.0e+00 | 0.0e+00 | 4.3e+01 | 2.2 | 1.4e+01 | 1.8e+01 | 148 |
| fr | 2001_05 | 1fwo:A | -0.0 | 0 | -4.362857e+01 | -1.745143e+01 | 1.1e+01 | 2.6e+01 | 4.0e+01 | 221 | 0.0e+00 | 0.0e+00 | 35 |
| fr | 2001_05 | 1g4y:B | 0.4 | 2.0 | -2.776364e+01 | -7.111723e+00 | 3.7e+00 | 7.4e+00 | 2.7e+01 | 3.2 | 1.7e+01 | 2.0e+01 | 81 |
| fr | 2001_05 | 1g5v:A | 0.5 | 2.0 | -1.090714e+01 | -1.082713e+01 | 0.0e+00 | 0.0e+00 | 1.0e+02 | 0.30 | 2.3e+01 | 2.9e+01 | 56 |
| fr | 2001_05 | 1g8f:A | 1.8 | 2.0 | -7.599004e-01 | 2.860107e+00 | 1.1e+01 | 1.4e+01 | 2.3e+01 | 2e-31 | 1.5e+01 | 1.6e+01 | 510 |
| fr | 2001_05 | 1g8l:A | 14.1 | 3.3 | -5.030406e+00 | 5.372620e+00 | 1.9e+01 | 2.3e+01 | 3.0e+01 | 2e-16 | 1.7e+01 | 2.6e+01 | 403 |
| fr | 2001_05 | 1hf2:A | 2.1 | 1.2 | -1.458386e+00 | -2.341429e+00 | 3.6e+00 | 5.6e+00 | 8.0e+01 | 2.2 | 1.9e+01 | 2.9e+01 | 196 |
| fr | 2001_05 | 1hf9:A | 1.3 | 2.6 | -1.651015e+01 | -7.707837e+00 | 2.4e+00 | 4.9e+00 | 7.8e+01 | 3.8 | 3.9e+01 | 4.4e+01 | 41 |
| fr | 2001_05 | 1huf:A | 1.5 | 2.8 | -9.849743e+00 | 5.050836e-01 | 3.3e+00 | 8.1e+00 | 5.0e+01 | 1.3 | 2.1e+01 | 2.4e+01 | 123 |
| fr | 2001_05 | 1hyn:Q | 0.7 | 2.0 | -5.397480e+00 | -7.336400e-01 | 0.0e+00 | 0.0e+00 | 3.2e+01 | 0.94 | 7.9e+00 | 9.9e+00 | 302 |
| fr | 2001_05 | 1i4t:A | 0.7 | 0.7 | -1.745131e+01 | -2.981720e+00 | 1.1e+00 | 1.1e+00 | 1.9e+01 | 8.6 | 6.1e+00 | 6.7e+00 | 180 |
| fr | 2001_05 | 1i7f:A | 4.3 | 2.3 | -1.001208e+01 | -2.209508e+00 | 0.0e+00 | 0.0e+00 | 2.7e+01 | 1.8 | 1.0e+01 | 1.2e+01 | 223 |
| fr | 2001_05 | 1i7w:B | 0.5 | 0 | -3.592941e+01 | -1.272500e+01 | 1.9e+01 | 2.1e+01 | 3.5e+01 | 2.7 | 0.0e+00 | 0.0e+00 | 48 |
| fr | 2001_05 | 1i9b:A | 0.3 | 0.0 | -1.527000e+01 | -2.949068e+00 | 0.0e+00 | 9.8e-01 | 2.0e+01 | 12 | 6.3e+00 | 7.8e+00 | 205 |
| fr | 2001_05 | 1i9y:A | 0.7 | 1.2 | -1.299574e+01 | -1.554261e+00 | 0.0e+00 | 6.0e-01 | 1.4e+01 | 10.0 | 6.0e+00 | 7.7e+00 | 336 |
| fr | 2001_05 | 1ib3:A | 1.6 | 1.2 | -8.982353e+00 | 7.088388e-03 | 2.7e+00 | 4.8e+00 | 2.0e+01 | 0.20 | 6.9e+00 | 9.6e+00 | 335 |
| fr | 2001_05 | 1ifq:A | 1.6 | 1.6 | -1.261745e+01 | -4.820317e+00 | 8.1e-01 | 4.0e+00 | 3.8e+01 | 18 | 9.7e+00 | 1.2e+01 | 124 |
| fr | 2001_05 | 1ihn:A | 1.4 | 1.6 | -1.053103e+01 | -4.981039e+00 | 2.7e+00 | 4.5e+00 | 5.2e+01 | 0.62 | 9.0e+00 | 1.2e+01 | 111 |
| fr | 2001_05 | 1iho:A | 0.9 | 2.8 | -1.050444e+01 | 1.287463e+00 | 1.8e+00 | 5.3e+00 | 2.0e+01 | 0.16 | 9.2e+00 | 1.3e+01 | 282 |
| fr | 2001_05 | 1ija:A | 1.8 | 2.6 | -1.913387e+01 | -3.995020e+00 | 1.4e+00 | 5.4e+00 | 2.1e+01 | 1.5 | 1.0e+01 | 1.1e+01 | 148 |
| fr | 2001_05 | 1in1:A | 8.1 | 3.3 | -8.852174e+00 | 1.057791e+01 | 3.6e+01 | 5.7e+01 | 7.8e+01 | 0.04 | 5.5e+01 | 5.8e+01 | 88 |
| fr | 2001_05 | 1j77:A | 21.3 | 6.3 | 4.870025e+00 | 1.834573e+01 | 6.6e+01 | 7.5e+01 | 9.0e+01 | 1e-51 | 7.5e+01 | 7.7e+01 | 199 |
| fr | 2001_05 | THIS_month:psum | 2.9 | 1.9 | 4.8 | 5.5 | 8.0 | 11.8 | 43.3 | 13.5 | 18.2 | 21.2 | 182.8 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |