| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_05 | THIS_month:psum | 9.6 | 3.9 | 11.5 | 11.2 | 26.2 | 36.1 | 87.1 | 4.4 | 47.4 | 52.8 | 200.9 |
| fr | 2001_05 | 1ews:A | 3.7 | 2.8 | 2.306223e+01 | 1.694170e+01 | 7.2e+01 | 8.1e+01 | 9.4e+01 | 2.68e+01 | 7.8e+01 | 8.1e+01 | 32 |
| fr | 2001_05 | 1f08:A | 8.5 | 3.1 | -5.357895e+00 | 3.383320e+00 | 1.6e+01 | 2.9e+01 | 7.7e+01 | 1.29e-01 | 4.6e+01 | 5.7e+01 | 148 |
| fr | 2001_05 | 1g4y:B | 9.9 | 4.4 | -7.635000e+00 | 2.184267e+01 | 4.2e+01 | 7.0e+01 | 9.9e+01 | 5.60e+00 | 6.8e+01 | 7.8e+01 | 81 |
| fr | 2001_05 | 1g5v:A | 5.4 | 3.3 | -1.197647e+01 | 2.329429e+01 | 3.9e+01 | 5.0e+01 | 9.1e+01 | 7.05e+00 | 6.2e+01 | 6.6e+01 | 56 |
| fr | 2001_05 | 1g8f:A | 17.2 | 3.7 | 2.699374e-01 | 4.338435e+00 | 1.4e+01 | 2.2e+01 | 5.1e+01 | 3.38e-04 | 2.3e+01 | 2.6e+01 | 510 |
| fr | 2001_05 | 1g8l:A | 14.4 | 4.4 | -2.103209e+00 | 5.604400e+00 | 3.5e+00 | 9.7e+00 | 6.5e+01 | 4.23e-05 | 2.6e+01 | 2.9e+01 | 403 |
| fr | 2001_05 | 1hf2:A | 2.4 | 2.3 | 2.414525e+00 | 2.361019e+00 | 2.0e+00 | 4.1e+00 | 8.9e+01 | 7.87e-01 | 1.2e+01 | 2.0e+01 | 196 |
| fr | 2001_05 | 1hf9:A | 5.9 | 4.4 | 3.428030e+01 | 2.951013e+01 | 7.6e+01 | 9.3e+01 | 1.0e+02 | 2.03e+01 | 8.3e+01 | 8.3e+01 | 41 |
| fr | 2001_05 | 1huf:A | 2.7 | 3.3 | -2.086573e-01 | 9.195474e+00 | 2.4e+00 | 5.7e+00 | 1.0e+02 | 5.37e+00 | 3.0e+01 | 3.9e+01 | 123 |
| fr | 2001_05 | 1i4t:A | 8.5 | 4.4 | 6.328751e+00 | 1.322381e+01 | 9.4e+00 | 1.6e+01 | 9.3e+01 | 9.21e-01 | 5.2e+01 | 5.3e+01 | 180 |
| fr | 2001_05 | 1i9b:A | 2.4 | 2.8 | -2.987229e+00 | 1.737272e+00 | 1.5e+00 | 2.4e+00 | 8.8e+01 | 3.12e+00 | 2.6e+01 | 3.0e+01 | 205 |
| fr | 2001_05 | 1i9y:A | 18.7 | 4.4 | -2.340230e+00 | 9.256354e+00 | 2.1e+01 | 3.8e+01 | 7.8e+01 | 1.52e-13 | 4.3e+01 | 5.0e+01 | 336 |
| fr | 2001_05 | 1ib3:A | 10.5 | 5.0 | -1.879385e+00 | 4.574270e+00 | 3.6e+00 | 9.6e+00 | 9.7e+01 | 1.40e-01 | 3.4e+01 | 4.4e+01 | 335 |
| fr | 2001_05 | 1iho:A | 12.7 | 4.4 | 8.457821e+00 | 5.908484e+00 | 7.4e+00 | 1.3e+01 | 8.0e+01 | 3.90e-01 | 3.4e+01 | 4.2e+01 | 282 |
| fr | 2001_05 | 1in1:A | 9.4 | 3.7 | -7.102326e+00 | 1.199411e+01 | 5.2e+01 | 6.6e+01 | 9.8e+01 | 5.47e-02 | 6.5e+01 | 6.7e+01 | 88 |
| fr | 2001_05 | 1j77:A | 22.0 | 6.1 | 6.240255e+00 | 1.760627e+01 | 5.8e+01 | 6.9e+01 | 9.4e+01 | 2.08e-01 | 7.7e+01 | 8.1e+01 | 199 |
| fr | 2001_05 | THIS_month:psum | 9.6 | 3.9 | 11.5 | 11.2 | 26.2 | 36.1 | 87.1 | 4.4 | 47.4 | 52.8 | 200.9 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |