| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_05 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2001_05 | THIS_month:psum | 8.8 | 3.6 | 7.9 | 9.6 | 21.9 | 31.9 | 77.6 | 4.4 | 44.4 | 49 | 200.9 |
| fr | 2001_05 | 1ews:A | 2.1 | 2.0 | -1.017103e+01 | 6.342121e+00 | 3.8e+01 | 5.3e+01 | 9.4e+01 | 2.68e+01 | 6.6e+01 | 6.6e+01 | 32 |
| fr | 2001_05 | 1f08:A | 8.5 | 2.6 | -5.357895e+00 | 3.383320e+00 | 1.6e+01 | 2.9e+01 | 7.7e+01 | 1.29e-01 | 4.6e+01 | 5.7e+01 | 148 |
| fr | 2001_05 | 1g4y:B | 9.9 | 4.4 | -9.396923e+00 | 2.184267e+01 | 4.2e+01 | 7.0e+01 | 8.0e+01 | 5.60e+00 | 6.8e+01 | 7.8e+01 | 81 |
| fr | 2001_05 | 1g5v:A | 4.7 | 2.6 | -1.650811e+01 | 2.329429e+01 | 3.9e+01 | 5.0e+01 | 6.6e+01 | 7.05e+00 | 6.2e+01 | 6.2e+01 | 56 |
| fr | 2001_05 | 1g8f:A | 17.2 | 3.7 | 1.165740e-02 | 4.338435e+00 | 1.4e+01 | 2.2e+01 | 3.1e+01 | 3.38e-04 | 2.3e+01 | 2.6e+01 | 510 |
| fr | 2001_05 | 1g8l:A | 14.4 | 4.4 | -3.646567e+00 | 5.604400e+00 | 3.5e+00 | 9.7e+00 | 4.1e+01 | 4.23e-05 | 2.6e+01 | 2.9e+01 | 403 |
| fr | 2001_05 | 1hf2:A | 2.4 | 1.6 | 2.414525e+00 | 2.361019e+00 | 0.0e+00 | 3.1e+00 | 8.9e+01 | 7.87e-01 | 1.0e+01 | 1.6e+01 | 196 |
| fr | 2001_05 | 1hf9:A | 4.2 | 4.2 | 2.979564e+01 | 2.616195e+01 | 5.9e+01 | 7.6e+01 | 8.8e+01 | 2.03e+01 | 7.6e+01 | 7.6e+01 | 41 |
| fr | 2001_05 | 1huf:A | 2.4 | 1.6 | -4.043355e+00 | 9.195474e+00 | 0.0e+00 | 8.1e-01 | 8.5e+01 | 5.37e+00 | 3.0e+01 | 3.9e+01 | 123 |
| fr | 2001_05 | 1i4t:A | 2.5 | 4.4 | 6.328751e+00 | 5.057887e+00 | 0.0e+00 | 0.0e+00 | 7.6e+01 | 9.21e-01 | 2.6e+01 | 2.7e+01 | 180 |
| fr | 2001_05 | 1i9b:A | 1.0 | 2.8 | -3.185441e+00 | 1.737272e+00 | 9.8e-01 | 2.0e+00 | 8.8e+01 | 3.12e+00 | 2.6e+01 | 3.0e+01 | 205 |
| fr | 2001_05 | 1i9y:A | 18.7 | 4.4 | -2.482927e+00 | 9.256354e+00 | 2.1e+01 | 3.8e+01 | 7.3e+01 | 1.52e-13 | 4.3e+01 | 4.8e+01 | 336 |
| fr | 2001_05 | 1ib3:A | 10.5 | 5.0 | -1.879385e+00 | 3.944009e+00 | 3.6e+00 | 9.6e+00 | 9.7e+01 | 1.40e-01 | 3.4e+01 | 4.0e+01 | 335 |
| fr | 2001_05 | 1iho:A | 10.9 | 4.4 | 2.840532e+00 | 2.360493e+00 | 4.6e+00 | 1.3e+01 | 7.9e+01 | 3.90e-01 | 3.3e+01 | 4.2e+01 | 282 |
| fr | 2001_05 | 1in1:A | 9.4 | 3.7 | -8.254054e+00 | 1.199411e+01 | 5.2e+01 | 6.6e+01 | 8.4e+01 | 5.47e-02 | 6.5e+01 | 6.7e+01 | 88 |
| fr | 2001_05 | 1j77:A | 22.0 | 6.1 | 6.240255e+00 | 1.760627e+01 | 5.8e+01 | 6.9e+01 | 9.4e+01 | 2.08e-01 | 7.7e+01 | 8.1e+01 | 199 |
| fr | 2001_05 | THIS_month:psum | 8.8 | 3.6 | 7.9 | 9.6 | 21.9 | 31.9 | 77.6 | 4.4 | 44.4 | 49 | 200.9 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |