| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_04 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2001_04 | THIS_month:psum | 1.7 | 1.8 | 17.6 | 10.3 | 7.2 | 9.6 | 35.6 | 4.5 | 15.6 | 18.4 | 159.5 |
| fr | 2001_04 | 1daq:A | 3.4 | 2.0 | -8.617395e-01 | -7.908218e+00 | 2.8e+00 | 7.0e+00 | 8.2e+01 | 0.01 | 1.4e+01 | 2.4e+01 | 71 |
| fr | 2001_04 | 1dp3:A | 2.2 | 2.8 | 1.493645e+00 | -1.107496e+01 | 3.6e+01 | 3.8e+01 | 4.0e+01 | 1.9 | 3.6e+01 | 3.6e+01 | 55 |
| fr | 2001_04 | 1fjr:A | 1.0 | 2.0 | -1.607353e+01 | -2.863582e+00 | 0.0e+00 | 0.0e+00 | 2.0e+01 | 8.5 | 1.0e+01 | 1.4e+01 | 188 |
| fr | 2001_04 | 1fo9:A | 1.2 | 3.1 | -9.851613e+00 | -8.786690e-01 | 3.0e-01 | 1.8e+00 | 1.9e+01 | 14 | 9.7e+00 | 1.2e+01 | 331 |
| fr | 2001_04 | 1fvz:A | 1.0 | 0.7 | -1.244133e+01 | -1.770250e+00 | 3.7e-01 | 1.1e+00 | 1.8e+01 | 1.4 | 4.5e+00 | 5.9e+00 | 269 |
| fr | 2001_04 | 1g13:A | 1.0 | 1.2 | -2.181429e+01 | -3.664985e+00 | 3.1e+00 | 5.0e+00 | 1.8e+01 | 5.4 | 1.0e+01 | 1.1e+01 | 160 |
| fr | 2001_04 | 1g57:A | 1.7 | 0 | -2.908571e+01 | -2.954585e+00 | 6.8e+00 | 8.3e+00 | 1.0e+01 | 10.0 | 0.0e+00 | 0.0e+00 | 205 |
| fr | 2001_04 | 1hyw:A | 0.6 | 1.6 | -2.181429e+01 | -9.157704e+00 | 3.4e+00 | 1.4e+01 | 4.8e+01 | 6.6 | 3.3e+01 | 3.3e+01 | 58 |
| fr | 2001_04 | 1i50:K | 5.0 | 3.5 | 3.372623e+01 | 1.030690e+01 | 3.0e+01 | 3.1e+01 | 3.1e+01 | 0.01 | 3.0e+01 | 3.1e+01 | 114 |
| fr | 2001_04 | 1i6h:L | 0.0 | 0.7 | -2.036000e+01 | -1.327779e+01 | 4.3e+00 | 4.3e+00 | 6.5e+01 | 5.9 | 2.8e+01 | 3.3e+01 | 46 |
| fr | 2001_04 | 1iaz:A | 0.3 | 2.0 | -6.858023e+00 | -3.456688e+00 | 0.0e+00 | 0.0e+00 | 5.1e+01 | 0.77 | 5.7e+00 | 1.1e+01 | 175 |
| fr | 2001_04 | 1ig3:B | 3.5 | 2.0 | -9.694461e+00 | -1.508493e+00 | 4.1e-01 | 4.9e+00 | 2.6e+01 | 0.29 | 7.4e+00 | 1.0e+01 | 243 |
| fr | 2001_04 | THIS_month:psum | 1.7 | 1.8 | 17.6 | 10.3 | 7.2 | 9.6 | 35.6 | 4.5 | 15.6 | 18.4 | 159.5 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |