| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_04 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_04 | THIS_month:psum | 4.4 | 2.8 | 12.1 | 5.3 | 10.3 | 19.2 | 88.7 | 4.1 | 33.9 | 39.7 | 148.6 |
| fr | 2001_04 | 1daq:A | 3.0 | 2.0 | -1.487405e+00 | -6.788945e-01 | 5.6e+00 | 1.1e+01 | 9.7e+01 | 6.62e+00 | 3.7e+01 | 4.5e+01 | 71 |
| fr | 2001_04 | 1dp3:A | 2.2 | 3.1 | -8.047436e+00 | -4.811767e+00 | 3.6e+00 | 1.8e+01 | 9.5e+01 | 1.57e+01 | 4.7e+01 | 5.3e+01 | 55 |
| fr | 2001_04 | 1fjr:A | 2.0 | 1.2 | -4.011584e+00 | -1.546446e+00 | 3.2e+00 | 6.4e+00 | 8.1e+01 | 2.59e+00 | 1.5e+01 | 2.3e+01 | 188 |
| fr | 2001_04 | 1fo9:A | 13.0 | 4.6 | -2.237361e+00 | 5.690609e+00 | 1.3e+01 | 2.4e+01 | 7.3e+01 | 1.58e-02 | 4.1e+01 | 4.7e+01 | 331 |
| fr | 2001_04 | 1g57:A | 1.4 | 1.6 | -3.286601e+00 | 7.828694e-01 | 1.5e+00 | 4.4e+00 | 8.9e+01 | 3.02e-01 | 1.2e+01 | 1.7e+01 | 205 |
| fr | 2001_04 | 1hyw:A | 3.3 | 3.9 | 5.275843e+00 | 4.911979e+00 | 1.6e+01 | 2.8e+01 | 1.0e+02 | 1.43e+01 | 4.1e+01 | 4.7e+01 | 58 |
| fr | 2001_04 | 1i50:K | 11.8 | 5.2 | 1.911691e+01 | 1.364560e+01 | 4.3e+01 | 6.2e+01 | 8.9e+01 | 1.45e-04 | 6.4e+01 | 7.1e+01 | 114 |
| fr | 2001_04 | 1i6h:L | 2.6 | 2.0 | -1.420465e+01 | -2.347821e+00 | 1.1e+01 | 2.6e+01 | 9.3e+01 | 1.19e-01 | 4.8e+01 | 5.0e+01 | 46 |
| fr | 2001_04 | 1iaz:A | 2.5 | 2.6 | -3.698932e+00 | 1.931256e+00 | 4.6e+00 | 7.4e+00 | 9.0e+01 | 1.02e+00 | 1.9e+01 | 2.5e+01 | 175 |
| fr | 2001_04 | 1ig3:B | 2.6 | 2.3 | -3.142130e+00 | -7.090668e-01 | 2.1e+00 | 4.9e+00 | 8.0e+01 | 3.52e-01 | 1.5e+01 | 1.9e+01 | 243 |
| fr | 2001_04 | THIS_month:psum | 4.4 | 2.8 | 12.1 | 5.3 | 10.3 | 19.2 | 88.7 | 4.1 | 33.9 | 39.7 | 148.6 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |