| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_04 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2001_04 | THIS_month:psum | 3.9 | 2.2 | 12.1 | 8.0 | 8.6 | 14.8 | 70.3 | 4.1 | 25.3 | 30.6 | 148.6 |
| fr | 2001_04 | 1daq:A | 1.7 | 1.2 | -1.023672e+01 | -8.072951e+00 | 5.6e+00 | 1.1e+01 | 7.6e+01 | 6.62e+00 | 2.3e+01 | 3.1e+01 | 71 |
| fr | 2001_04 | 1dp3:A | 1.0 | 3.1 | -9.898221e+00 | -7.457754e+00 | 3.6e+00 | 1.3e+01 | 8.4e+01 | 1.57e+01 | 3.6e+01 | 3.6e+01 | 55 |
| fr | 2001_04 | 1fjr:A | 1.2 | 1.2 | -5.246119e+00 | -2.222698e+00 | 1.1e+00 | 1.6e+00 | 6.0e+01 | 2.59e+00 | 1.0e+01 | 1.4e+01 | 188 |
| fr | 2001_04 | 1fo9:A | 13.0 | 4.1 | -2.677737e+00 | 5.690609e+00 | 1.3e+01 | 2.4e+01 | 6.4e+01 | 1.58e-02 | 4.1e+01 | 4.7e+01 | 331 |
| fr | 2001_04 | 1g57:A | 0.9 | 1.2 | -3.286601e+00 | -1.659263e+00 | 4.9e-01 | 1.5e+00 | 8.5e+01 | 3.02e-01 | 1.2e+01 | 1.7e+01 | 205 |
| fr | 2001_04 | 1hyw:A | 3.3 | 3.7 | 5.275843e+00 | 4.911979e+00 | 1.0e+01 | 1.4e+01 | 9.3e+01 | 1.43e+01 | 2.8e+01 | 3.4e+01 | 58 |
| fr | 2001_04 | 1i50:K | 11.8 | 5.2 | 1.911691e+01 | 1.364560e+01 | 4.3e+01 | 6.2e+01 | 8.4e+01 | 1.45e-04 | 6.4e+01 | 7.1e+01 | 114 |
| fr | 2001_04 | 1i6h:L | 2.6 | 0.0 | -1.745143e+01 | -1.327826e+01 | 4.3e+00 | 1.3e+01 | 7.6e+01 | 1.19e-01 | 1.3e+01 | 2.6e+01 | 46 |
| fr | 2001_04 | 1iaz:A | 2.0 | 1.6 | -7.716224e+00 | -1.640472e+00 | 4.6e+00 | 7.4e+00 | 4.5e+01 | 1.02e+00 | 1.9e+01 | 2.2e+01 | 175 |
| fr | 2001_04 | 1ig3:B | 1.6 | 0.7 | -7.020625e+00 | -2.038997e+00 | 4.1e-01 | 8.2e-01 | 3.6e+01 | 3.52e-01 | 7.4e+00 | 8.6e+00 | 243 |
| fr | 2001_04 | THIS_month:psum | 3.9 | 2.2 | 12.1 | 8.0 | 8.6 | 14.8 | 70.3 | 4.1 | 25.3 | 30.6 | 148.6 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |